Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D06
         (801 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031...    32   0.46 
04_01_0277 + 3681869-3681922,3681946-3682004,3683011-3683631,368...    31   1.4  
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373...    30   2.5  
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333...    29   3.3  
01_03_0121 - 12722492-12722920                                         29   3.3  
04_04_1078 - 30655212-30655289,30655614-30655811,30655916-306560...    28   9.9  

>05_06_0234 -
           26602660-26602728,26602814-26602988,26603077-26603120,
           26603204-26603381,26603468-26603652,26603737-26603801,
           26603985-26604066,26604342-26604434,26605096-26605191,
           26605312-26605355,26605467-26605530
          Length = 364

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 441 LEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 590
           LE +VRKR   + ++ SQ +DL  KF +      +KY+  +  L  K  E
Sbjct: 53  LEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYE 102


>04_01_0277 +
           3681869-3681922,3681946-3682004,3683011-3683631,
           3683718-3684147
          Length = 387

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +3

Query: 429 QKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQ 608
           +K +LEH V    Y+   L+++ +DL+ +  K   + VS Y  K + L+ K  E   +N 
Sbjct: 59  EKRNLEHRVGNLVYQNISLSNEKDDLKNQLEKKR-RAVSVYLGKVSTLEYKVQELENQNT 117

Query: 609 L---KVVKKKE 632
               ++VK++E
Sbjct: 118 KLSGELVKQRE 128


>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
            24737484-24737549,24737629-24737799,24737901-24737999,
            24738075-24738186,24738282-24738343,24738412-24738483,
            24738583-24738681,24738764-24738997,24739104-24739178,
            24739299-24739386,24739478-24739638,24739734-24739841,
            24739934-24741922,24742007-24742279,24742957-24743295,
            24743449-24745038,24745166-24745241,24745333-24745412,
            24745614-24745679,24745761-24745830,24745899-24746134,
            24746149-24746319,24746915-24747097,24747176-24747241,
            24747326-24747389,24747472-24747530,24747612-24747699,
            24747799-24747891,24747956-24748116,24748215-24748307,
            24748405-24748518,24748654-24748773,24748852-24748935,
            24749016-24749171,24749518-24750154,24752874-24752929
          Length = 2815

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
 Frame = +3

Query: 423  EGQKWDLEHEVRKRDYEISDLNSQVN-DLRGKFV---KPTLKKVSKYENKFAKLQKK 581
            E  +  LEH ++KRD EIS LN++++   R +F+   +P ++ +  +EN  + LQ K
Sbjct: 1005 ESNQQSLEH-LKKRDLEISRLNNELDVHRRQEFLAMEEPKVQLLKCFENDDSPLQTK 1060


>08_02_1322 +
           26131395-26131599,26132382-26132468,26133119-26133372,
           26133430-26133526,26133613-26133693,26133782-26133976,
           26134093-26134182,26134296-26134471,26134565-26134687,
           26134799-26134945,26135027-26135163,26135247-26135364,
           26135462-26135518
          Length = 588

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +3

Query: 336 CGKPKNIDDANEAMLKRIIQEYYDRMYVCEGQKWDLEH--EVRKRDYEISDLNSQVNDLR 509
           C K   +D  N   L R  Q Y  ++   E  + D++   E+   + ++ D+     +L+
Sbjct: 483 CTKVLELDSQNVKALYRRAQAYM-QLADLELAEVDIKKALEIDPDNRQVLDVKLTYKNLK 541

Query: 510 GKFVKPTLKKVSKYENKFAKLQKKAAE 590
            K  +   K    Y N FAK+ K+ AE
Sbjct: 542 EKVKEYNKKDAKFYSNMFAKMTKQPAE 568


>01_03_0121 - 12722492-12722920
          Length = 142

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 149 PEAR*GAQAHGGGLQSQKGEEGFHD 223
           PEAR G  A GGG +SQ+   GF D
Sbjct: 80  PEARDGGVATGGGARSQEAGGGFGD 104


>04_04_1078 -
           30655212-30655289,30655614-30655811,30655916-30656086,
           30656172-30656252,30656464-30656565,30656671-30656779,
           30656900-30656965,30657566-30657630,30658386-30658475,
           30658952-30659123,30659831-30659943,30660046-30660219,
           30660300-30660347,30662041-30662205
          Length = 543

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 435 WDLEHEVRKRDYEISDLNSQVNDLRGKFVK 524
           WD +  VR+ + EIS L+ +VN LR +  K
Sbjct: 45  WDRQSLVREYESEISRLDDKVNQLRDQLRK 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,949,115
Number of Sequences: 37544
Number of extensions: 256976
Number of successful extensions: 612
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)