Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D03
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.9  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 138 LSPCSPTCPGDTGKAFAP 85
           + PC    PG +G+ F P
Sbjct: 42  VKPCVSCGPGQSGQCFGP 59


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 72  KDYLVAQRPFQYHQDMW 122
           +D   A  PF YH D W
Sbjct: 922 RDTSGATGPFAYHGDQW 938


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 389 YKLRNRIFRIVEIEPKKC 336
           Y+L N  F + +I+P  C
Sbjct: 32  YRLNNGKFTVEDIDPTLC 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,240
Number of Sequences: 336
Number of extensions: 1846
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)