Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D03
         (527 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0411 - 18739279-18739902,18741471-18741671                       29   3.1  
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228...    28   4.0  
02_03_0248 - 16820997-16821275,16821979-16822147,16822350-16822678     28   4.0  
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265...    28   5.3  
09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666     27   9.3  
09_04_0361 - 16948740-16948860,16948951-16949018,16949424-169495...    27   9.3  

>02_03_0411 - 18739279-18739902,18741471-18741671
          Length = 274

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 91  KGLSSITRTCGRARAQPGGAGLASAS 168
           +  SS +R C RAR + GG G A+A+
Sbjct: 99  RSASSSSRRCSRARGRGGGGGAAAAA 124


>10_08_0824 +
           20821724-20822137,20822457-20822543,20822729-20822829,
           20822917-20822967,20823616-20823790,20823878-20824192,
           20824504-20824707,20824799-20825314,20825400-20825609,
           20826092-20826280,20827254-20827405,20827685-20827837,
           20827925-20828006,20828086-20828475
          Length = 1012

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 120 WASKGSARRGGISERLQKRPNNSKRP 197
           WA+  SA  GG + R ++RP  S RP
Sbjct: 25  WAASSSAGGGGAASRRRRRPGLSCRP 50


>02_03_0248 - 16820997-16821275,16821979-16822147,16822350-16822678
          Length = 258

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 249 NLSVSLFHSGPFLYVSVRFENFI*CFPKNTFFGF 350
           NL++ LF SG   Y  +RF +    FPK T F +
Sbjct: 205 NLNIVLFFSGNPPYRWLRFSSITIDFPKRTIFAY 238


>06_01_0369 +
           2651192-2651862,2652103-2652158,2652816-2652874,
           2653094-2653165,2653356-2653439,2654522-2654629,
           2655543-2655605,2655733-2655813,2656316-2656421,
           2657111-2657244,2657753-2657830,2658462-2658500,
           2658673-2658755,2659228-2659300,2659842-2660012
          Length = 625

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 386 KLRNRIFRIVEIEPKKCVFWKTSNKVFKP-NRDVE 285
           ++  R+  I ++  KKCV  KTS K+ +P N ++E
Sbjct: 572 RMDKRVLAIAKLGYKKCVVPKTSEKLLRPLNLELE 606


>09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666
          Length = 366

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 392 LYKLRNRIFRIVEIEPKKCVFWKTSNKVFKPNRDVE 285
           ++ L+  +  I E++  KC  W+ + K F P+RD E
Sbjct: 138 IHGLKIELDIIPEVDLYKCEPWELAEKSFLPSRDPE 173


>09_04_0361 -
           16948740-16948860,16948951-16949018,16949424-16949510,
           16949626-16949694,16949786-16949854,16949944-16950765
          Length = 411

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 165 GAR*SRPSWLSPCSPTCPGDTGKAFA 88
           GA  SR +WLS    +C  DT  AFA
Sbjct: 212 GAAMSRSNWLSRWMSSCSDDTKTAFA 237


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,677,479
Number of Sequences: 37544
Number of extensions: 191432
Number of successful extensions: 462
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)