Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D03
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.51 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.90 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.1  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   4.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.3  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.3  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 371 CDFLACINRLDCYSNCFCVM*IFWIFN 451
           CDF AC  +++C   C C     W  N
Sbjct: 747 CDFYACDCKMECPKQCTCYHDQSWSSN 773


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 86  GAKAFPVSPGHVGEQGLSQEGRD 154
           G K F   PG +GE+GL  E  D
Sbjct: 421 GEKGFKGEPGRIGERGLMGEKGD 443


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 371 CDFLACINRLDCYSNCFCVM*IFWIFN 451
           C+F AC   + C +NC C     W  N
Sbjct: 783 CEFDACDCEMTCPNNCACYHDNSWSTN 809


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 142 GGAGLASASKKDLTTQNDPFQRLFYSNDEK*LKK 243
           GGAGLA   +     +  P   +FY  D + +K+
Sbjct: 258 GGAGLAGIHQCCAPVKYSPMSLIFYGPDGRIIKQ 291


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 132 GSARRGGISERLQKRPNNSKRP 197
           GS RRGG +   +KR ++ ++P
Sbjct: 415 GSRRRGGSTTDREKRLSHDRKP 436


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 132 GSARRGGISERLQKRPNNSKRP 197
           GS RRGG +   +KR ++ ++P
Sbjct: 416 GSRRRGGSTTDREKRLSHDRKP 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,575
Number of Sequences: 2352
Number of extensions: 7357
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)