Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D01
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0167 - 14649782-14649864,14649954-14650078,14650357-146504...    29   3.5  
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159...    28   8.1  
03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34...    28   8.1  

>07_03_0167 -
           14649782-14649864,14649954-14650078,14650357-14650400,
           14650873-14651003,14652469-14652559,14653335-14653445,
           14653623-14653774,14653863-14654067,14654436-14654764,
           14654850-14655309
          Length = 576

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -3

Query: 559 HAPLCAFHPGAFHF-YHDTLYQNFVPFHIQVLNSLSNSVSDFL 434
           HA  C F  G  +  +H   Y  FVPFHI   +   + +  F+
Sbjct: 99  HARSCTFSDGIIYICFHS--YSQFVPFHILTSHCTKDDMDSFM 139


>06_01_0209 +
           1587656-1587876,1587964-1588055,1590520-1590545,
           1591130-1591370,1591459-1591554,1591639-1591754,
           1591837-1591917,1592597-1592720,1593222-1593271,
           1593735-1593825,1594386-1594421,1594502-1594602,
           1594684-1594800
          Length = 463

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 364 HRNDNAGTVDG*KV*VGSSAAMDRGNR*QSSTKSSGLGYEKVQNFGTMYHDR 519
           +RND A +    +     S   +RG +  S  KSS  G + VQ  G  Y D+
Sbjct: 121 NRNDRAASTSFHRPTSQPSPTFNRGGQASSHQKSSSGGAKPVQRAGANYDDK 172


>03_01_0038 -
           340564-341108,341214-341463,341546-341649,341728-343255,
           343995-344056,344578-344728
          Length = 879

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 441 ISSVHRGA*SDLYFLPINCSCIVVTMISRTF 349
           I  +H+G  +D   LP +C C  +T+I  T+
Sbjct: 761 IEELHQGNQTDDLKLPFDCICEAITIIQETY 791


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,665,898
Number of Sequences: 37544
Number of extensions: 316323
Number of successful extensions: 629
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)