BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_D01
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113461-1|AAM29466.1| 173|Drosophila melanogaster RE37471p pro... 78 1e-14
AJ863565-1|CAI10732.1| 173|Drosophila melanogaster dynein light... 78 1e-14
AE014297-1064|AAF54474.1| 173|Drosophila melanogaster CG5359-PA... 78 1e-14
BT024239-1|ABC86301.1| 179|Drosophila melanogaster IP16258p pro... 64 2e-10
AE014296-2507|AAF49639.1| 142|Drosophila melanogaster CG7276-PA... 64 2e-10
AE014296-2506|AAS64993.1| 171|Drosophila melanogaster CG7276-PB... 64 2e-10
BT025003-1|ABE01233.1| 97|Drosophila melanogaster IP05158p pro... 59 5e-09
Y08968-1|CAA70165.1| 111|Drosophila melanogaster Tctex protein ... 56 5e-08
AY069608-1|AAL39753.1| 111|Drosophila melanogaster LD36705p pro... 56 5e-08
AF123058-1|AAD30033.1| 111|Drosophila melanogaster dynein light... 56 5e-08
AE014297-2495|AAF55532.1| 111|Drosophila melanogaster CG12363-P... 56 5e-08
AY070813-1|AAL48435.1| 189|Drosophila melanogaster AT23443p pro... 29 4.6
AE013599-556|AAF59159.1| 189|Drosophila melanogaster CG14763-PA... 29 4.6
BT001532-1|AAN71287.1| 411|Drosophila melanogaster RE06837p pro... 29 8.0
AY071185-1|AAL48807.1| 852|Drosophila melanogaster RE23490p pro... 29 8.0
AY058369-1|AAL13598.1| 389|Drosophila melanogaster GH13848p pro... 29 8.0
AE014296-2741|AAF49460.2| 852|Drosophila melanogaster CG32159-P... 29 8.0
AE014296-762|AAN11585.1| 389|Drosophila melanogaster CG14995-PB... 29 8.0
AE014296-761|AAF47837.1| 454|Drosophila melanogaster CG14995-PA... 29 8.0
AE014296-760|AAN11584.1| 411|Drosophila melanogaster CG14995-PC... 29 8.0
AE014296-759|AAN11583.1| 354|Drosophila melanogaster CG14995-PD... 29 8.0
>AY113461-1|AAM29466.1| 173|Drosophila melanogaster RE37471p
protein.
Length = 173
Score = 78.2 bits (184), Expect = 1e-14
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 353 VREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDM-KRYKILVQCIMIEMKG 529
++ I+ M E+L + Y D A +WT EIA+ V Q++ + KRYK +VQ ++ + G
Sbjct: 74 IKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVMLGQELG 133
Query: 530 AGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
AG RC WD + D V ++F N +++C +G Y Y
Sbjct: 134 AGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFGTYQY 173
>AJ863565-1|CAI10732.1| 173|Drosophila melanogaster dynein light
chain protein.
Length = 173
Score = 78.2 bits (184), Expect = 1e-14
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 353 VREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDM-KRYKILVQCIMIEMKG 529
++ I+ M E+L + Y D A +WT EIA+ V Q++ + KRYK +VQ ++ + G
Sbjct: 74 IKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVMLGQELG 133
Query: 530 AGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
AG RC WD + D V ++F N +++C +G Y Y
Sbjct: 134 AGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFGTYQY 173
>AE014297-1064|AAF54474.1| 173|Drosophila melanogaster CG5359-PA
protein.
Length = 173
Score = 78.2 bits (184), Expect = 1e-14
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 353 VREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDM-KRYKILVQCIMIEMKG 529
++ I+ M E+L + Y D A +WT EIA+ V Q++ + KRYK +VQ ++ + G
Sbjct: 74 IKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVMLGQELG 133
Query: 530 AGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
AG RC WD + D V ++F N +++C +G Y Y
Sbjct: 134 AGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFGTYQY 173
>BT024239-1|ABC86301.1| 179|Drosophila melanogaster IP16258p
protein.
Length = 179
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +2
Query: 326 PFFGRKSQ--NVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMK-RYKI 496
P FG+K +R +I ++E+L + Y +A +WT E+A+ + +++ R+K
Sbjct: 69 PAFGKKFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKH 128
Query: 497 LVQCIMIEMKGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
+V ++ + GAG R +WD +DDY+ F + C +G Y Y
Sbjct: 129 VVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAVFGCYQY 179
>AE014296-2507|AAF49639.1| 142|Drosophila melanogaster CG7276-PA,
isoform A protein.
Length = 142
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +2
Query: 326 PFFGRKSQ--NVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMK-RYKI 496
P FG+K +R +I ++E+L + Y +A +WT E+A+ + +++ R+K
Sbjct: 32 PAFGKKFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKH 91
Query: 497 LVQCIMIEMKGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
+V ++ + GAG R +WD +DDY+ F + C +G Y Y
Sbjct: 92 VVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAVFGCYQY 142
>AE014296-2506|AAS64993.1| 171|Drosophila melanogaster CG7276-PB,
isoform B protein.
Length = 171
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +2
Query: 326 PFFGRKSQ--NVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMK-RYKI 496
P FG+K +R +I ++E+L + Y +A +WT E+A+ + +++ R+K
Sbjct: 61 PAFGKKFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKH 120
Query: 497 LVQCIMIEMKGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
+V ++ + GAG R +WD +DDY+ F + C +G Y Y
Sbjct: 121 VVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAVFGCYQY 171
>BT025003-1|ABE01233.1| 97|Drosophila melanogaster IP05158p
protein.
Length = 97
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +2
Query: 362 IIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMK-RYKILVQCIMIEMKGAGV 538
+I ++E+L + Y +A +WT E+A+ + +++ R+K +V ++ + GAG
Sbjct: 1 MIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVMLYQQTGAGC 60
Query: 539 KCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGIYMY 649
R +WD +DDY+ F + C +G Y Y
Sbjct: 61 FYGARAIWDELSDDYITFTFDGGSFICIAAVFGCYQY 97
>Y08968-1|CAA70165.1| 111|Drosophila melanogaster Tctex protein
protein.
Length = 111
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/99 (28%), Positives = 50/99 (50%)
Frame = +2
Query: 344 SQNVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMKRYKILVQCIMIEM 523
S+ ++E I TT+ G Y+ D+ WT ++ V + K YK +V ++++
Sbjct: 16 SKTIKEAIETTIG----GNAYQHDKVNNWTGQVVENCLT-VLTKEQKPYKYIVTAMIMQK 70
Query: 524 KGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGI 640
GAG+ A C W+ +TD + N+T+YC +G+
Sbjct: 71 NGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGL 109
>AY069608-1|AAL39753.1| 111|Drosophila melanogaster LD36705p
protein.
Length = 111
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/99 (28%), Positives = 50/99 (50%)
Frame = +2
Query: 344 SQNVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMKRYKILVQCIMIEM 523
S+ ++E I TT+ G Y+ D+ WT ++ V + K YK +V ++++
Sbjct: 16 SKTIKEAIETTIG----GNAYQHDKVNNWTGQVVENCLT-VLTKEQKPYKYIVTAMIMQK 70
Query: 524 KGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGI 640
GAG+ A C W+ +TD + N+T+YC +G+
Sbjct: 71 NGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGL 109
>AF123058-1|AAD30033.1| 111|Drosophila melanogaster dynein light
chain subunit protein.
Length = 111
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/99 (28%), Positives = 50/99 (50%)
Frame = +2
Query: 344 SQNVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMKRYKILVQCIMIEM 523
S+ ++E I TT+ G Y+ D+ WT ++ V + K YK +V ++++
Sbjct: 16 SKTIKEAIETTIG----GNAYQHDKVNNWTGQVVENCLT-VLTKEQKPYKYIVTAMIMQK 70
Query: 524 KGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGI 640
GAG+ A C W+ +TD + N+T+YC +G+
Sbjct: 71 NGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGL 109
>AE014297-2495|AAF55532.1| 111|Drosophila melanogaster CG12363-PA
protein.
Length = 111
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/99 (28%), Positives = 50/99 (50%)
Frame = +2
Query: 344 SQNVREIIVTTMQEQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMKRYKILVQCIMIEM 523
S+ ++E I TT+ G Y+ D+ WT ++ V + K YK +V ++++
Sbjct: 16 SKTIKEAIETTIG----GNAYQHDKVNNWTGQVVENCLT-VLTKEQKPYKYIVTAMIMQK 70
Query: 524 KGAGVKCAQRCMWDPETDDYVGDLFRNETIYCYTVAYGI 640
GAG+ A C W+ +TD + N+T+YC +G+
Sbjct: 71 NGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGL 109
>AY070813-1|AAL48435.1| 189|Drosophila melanogaster AT23443p
protein.
Length = 189
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +2
Query: 383 EQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMKRYKILVQCIMIEMKGAGVKCAQRCMW 562
E + K+ A + +EEI NR++ + + D RY +LV M+G + +W
Sbjct: 105 EYMFHPKHSLHMAAQVSEEIKNRIK--LDNYDRYRYIVLVTVGEFLMQG--LYSMVNFLW 160
Query: 563 DPETDDYVGDLFRNETIYCYTVAYGIY 643
D E D +V + + + +Y
Sbjct: 161 DAEKDGFVTYSVERPSYFAVCTTFYLY 187
>AE013599-556|AAF59159.1| 189|Drosophila melanogaster CG14763-PA
protein.
Length = 189
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +2
Query: 383 EQLMGRKYRSDQAPRWTEEIANRVRQRVQDLDMKRYKILVQCIMIEMKGAGVKCAQRCMW 562
E + K+ A + +EEI NR++ + + D RY +LV M+G + +W
Sbjct: 105 EYMFHPKHSLHMAAQVSEEIKNRIK--LDNYDRYRYIVLVTVGEFLMQG--LYSMVNFLW 160
Query: 563 DPETDDYVGDLFRNETIYCYTVAYGIY 643
D E D +V + + + +Y
Sbjct: 161 DAEKDGFVTYSVERPSYFAVCTTFYLY 187
>BT001532-1|AAN71287.1| 411|Drosophila melanogaster RE06837p
protein.
Length = 411
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 508 TLYQNFVPFHIQVLNSLSNSVSDFLCPSRRLIRPILSTHQLFLHCRYDDLAN 353
++ ++ +H + +N SN +S LC + L L + + CR D+LAN
Sbjct: 359 SVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELAN 410
>AY071185-1|AAL48807.1| 852|Drosophila melanogaster RE23490p
protein.
Length = 852
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 412 GSSAAMDRGNR*QSSTKSSGLGYE----KVQNFGTMYHDRNERRRGEMRTAVHVGSGNG 576
G S++ NR +S S + + NF + + RN RRG++ + SG+G
Sbjct: 709 GGSSSYQYLNRPESGVSHSSANFRPDQFSINNFPSSNYGRNNERRGDLPPIEAISSGSG 767
>AY058369-1|AAL13598.1| 389|Drosophila melanogaster GH13848p
protein.
Length = 389
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 508 TLYQNFVPFHIQVLNSLSNSVSDFLCPSRRLIRPILSTHQLFLHCRYDDLAN 353
++ ++ +H + +N SN +S LC + L L + + CR D+LAN
Sbjct: 337 SVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELAN 388
>AE014296-2741|AAF49460.2| 852|Drosophila melanogaster CG32159-PB
protein.
Length = 852
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 412 GSSAAMDRGNR*QSSTKSSGLGYE----KVQNFGTMYHDRNERRRGEMRTAVHVGSGNG 576
G S++ NR +S S + + NF + + RN RRG++ + SG+G
Sbjct: 709 GGSSSYQYLNRPESGVSHSSANFRPDQFSINNFPSSNYGRNNERRGDLPPIEAISSGSG 767
>AE014296-762|AAN11585.1| 389|Drosophila melanogaster CG14995-PB,
isoform B protein.
Length = 389
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 508 TLYQNFVPFHIQVLNSLSNSVSDFLCPSRRLIRPILSTHQLFLHCRYDDLAN 353
++ ++ +H + +N SN +S LC + L L + + CR D+LAN
Sbjct: 337 SVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELAN 388
>AE014296-761|AAF47837.1| 454|Drosophila melanogaster CG14995-PA,
isoform A protein.
Length = 454
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 508 TLYQNFVPFHIQVLNSLSNSVSDFLCPSRRLIRPILSTHQLFLHCRYDDLAN 353
++ ++ +H + +N SN +S LC + L L + + CR D+LAN
Sbjct: 402 SVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELAN 453
>AE014296-760|AAN11584.1| 411|Drosophila melanogaster CG14995-PC,
isoform C protein.
Length = 411
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 508 TLYQNFVPFHIQVLNSLSNSVSDFLCPSRRLIRPILSTHQLFLHCRYDDLAN 353
++ ++ +H + +N SN +S LC + L L + + CR D+LAN
Sbjct: 359 SVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELAN 410
>AE014296-759|AAN11583.1| 354|Drosophila melanogaster CG14995-PD,
isoform D protein.
Length = 354
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 508 TLYQNFVPFHIQVLNSLSNSVSDFLCPSRRLIRPILSTHQLFLHCRYDDLAN 353
++ ++ +H + +N SN +S LC + L L + + CR D+LAN
Sbjct: 302 SVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELAN 353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,766,922
Number of Sequences: 53049
Number of extensions: 554772
Number of successful extensions: 1089
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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