Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D01
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.5  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -2

Query: 296 FVQFSRGYR*LTFCS--CRCFCLFFNNILIIGHDAS 195
           +  FS+ +R   F S  C+CFC    N L  G D S
Sbjct: 62  YALFSKDFR-FAFKSIICKCFCKRRTNTLRRGSDGS 96


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -2

Query: 296 FVQFSRGYR*LTFCS--CRCFCLFFNNILIIGHDAS 195
           +  FS+ +R   F S  C+CFC    N L  G D S
Sbjct: 510 YALFSKDFR-FAFKSIICKCFCKRRTNTLRRGSDGS 544


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 520 NERRRGEMRTAVHVGSG 570
           N R RG++RT +  G G
Sbjct: 392 NRRARGQLRTKIESGEG 408


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 472 VLNSLSNSVSDFLCPSRRLIRPILS 398
           +LNS+ N+VS   C S  L  P L+
Sbjct: 3   ILNSMYNNVSPLQCTSPFLGGPQLT 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,932
Number of Sequences: 438
Number of extensions: 3487
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)