Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_C15
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   7.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +1

Query: 520 GKQFLSAAYDRYIKLWDTESGACVSRFTSRKVPYCAKFHPDADKQHLFVAGTSDKKIICW 699
           G + LSAA  R+I+      G  +S+  +R V  C  F     K +L    +S   ++  
Sbjct: 685 GSEALSAATVRFIEAEPQPIGKALSKCHNRNVTTCNMFR----KTNLSGDSSSGTTLLLE 740

Query: 700 --DVRSGEIXQEYDRHLG 747
             D+ S EI  +   HLG
Sbjct: 741 LDDIASMEILYKPGDHLG 758


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 428 TLQSMPAESMRCAVEGNQRAAAT 360
           TLQ  PA S++C+  GN     T
Sbjct: 432 TLQPGPAVSLKCSAAGNPTPQVT 454



 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 587  HAPDSVSHSFMYRSYAADRNC 525
            H  +++ HSFMY  +A    C
Sbjct: 1731 HPNNTLLHSFMYHEHAMTEGC 1751


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 428 TLQSMPAESMRCAVEGNQRAAAT 360
           TLQ  PA S++C+  GN     T
Sbjct: 432 TLQPGPAVSLKCSAAGNPTPQVT 454



 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 587  HAPDSVSHSFMYRSYAADRNC 525
            H  +++ HSFMY  +A    C
Sbjct: 1727 HPNNTLLHSFMYHEHAMTEGC 1747


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 635 WNLAQYGTFRDVNRDTH 585
           WN++ YG  RD+    H
Sbjct: 87  WNVSDYGGVRDLRIPPH 103


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 376 WFPSTAHLMLSAGMDCRVKIWEVYGDRRCIRTYFGHRQAVRDVNFNNSGKQFLSAAYD 549
           W  S  ++    G  CR     +Y  R C++TY  +     +     S ++F+ +A+D
Sbjct: 262 WLGSGQYISDFVG-SCRKTDQILYFIRGCLQTYLINASTYLNEVHTASLRKFILSAFD 318


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 376 WFPSTAHLMLSAGMDCRVKIWEVYGDRRCIRTYFGHRQAVRDVNFNNSGKQFLSAAYD 549
           W  S  ++    G  CR     +Y  R C++TY  +     +     S ++F+ +A+D
Sbjct: 300 WLGSGQYISDFVG-SCRKTDQILYFIRGCLQTYLINASTYLNEVHTASLRKFILSAFD 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,990
Number of Sequences: 438
Number of extensions: 4060
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)