Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_C14
(796 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 454 e-129
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 260 2e-70
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 246 2e-66
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 173 2e-44
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 118 1e-27
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 113 4e-26
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 103 4e-23
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 75 2e-14
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 69 8e-13
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 38 0.002
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.11
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.19
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.19
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.77
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 4.1
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.4
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 26 5.4
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 5.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 5.4
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 26 7.1
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 25 9.4
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 9.4
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 25 9.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 9.4
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 9.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 9.4
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 454 bits (1119), Expect = e-129
Identities = 209/228 (91%), Positives = 220/228 (96%)
Frame = +1
Query: 112 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 291
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 292 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 471
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 472 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 651
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181
Query: 652 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFXQEMAT 795
GRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDF QE+ T
Sbjct: 182 GRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQT 229
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 260 bits (637), Expect = 2e-70
Identities = 117/221 (52%), Positives = 163/221 (73%), Gaps = 1/221 (0%)
Frame = +1
Query: 130 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 309
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 310 KYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 486
+ PIE GI+ NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 487 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 666
N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+T
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191
Query: 667 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFXQEM 789
DYL L + G+ ++AE+EIVR+IKEK CYVA DF E+
Sbjct: 192 DYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEI 232
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 246 bits (603), Expect = 2e-66
Identities = 114/221 (51%), Positives = 160/221 (72%), Gaps = 2/221 (0%)
Frame = +1
Query: 118 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 291
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 292 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 471
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 472 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 651
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+A
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVA 181
Query: 652 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 774
GRD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D
Sbjct: 182 GRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYD 222
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 173 bits (421), Expect = 2e-44
Identities = 102/255 (40%), Positives = 143/255 (56%), Gaps = 34/255 (13%)
Frame = +1
Query: 130 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 258
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 259 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 417
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 418 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 573
LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 574 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIK 747
GDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER IK
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IK 241
Query: 748 EKLCYVALDFXQEMA 792
E+ CYV D +E +
Sbjct: 242 EECCYVCPDIVKEFS 256
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 118 bits (284), Expect = 1e-27
Identities = 65/224 (29%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Frame = +1
Query: 130 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 309
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 310 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 486
+ P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 487 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 660
+N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201
Query: 661 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFXQEMA 792
+ YL+K+ + SF + C+V+ D+ ++A
Sbjct: 202 SSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIA 245
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 113 bits (271), Expect = 4e-26
Identities = 64/196 (32%), Positives = 101/196 (51%)
Frame = +1
Query: 115 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 294
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 295 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 474
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 475 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 654
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 655 RDLTDYLMKILTERGY 702
+ D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 103 bits (246), Expect = 4e-23
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +1
Query: 115 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 294
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 295 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 468
I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 469 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 648
+ FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I + L
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181
Query: 649 AGRDLTDYLMKILTERGYSF 708
AG L + ++ F
Sbjct: 182 AGDFLNANIEQLFNTMNIEF 201
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 74.5 bits (175), Expect = 2e-14
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Frame = +1
Query: 130 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 309
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 310 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 477
++ H G + +W +W N + P ++ +LLT+ + Q++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 478 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYEGY 615
FE F A A L + G T +V+DSG +H +P+ +
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFS 177
Query: 616 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFXQEM 789
A+ R+D+ G+ LT+YL ++++ R Y+ E IV +IKE +CYV+ +F ++M
Sbjct: 178 VQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKESVCYVSQNFKEDM 233
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 68.9 bits (161), Expect = 8e-13
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Frame = +1
Query: 316 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 483
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 484 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 663
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231
Query: 664 TDYLMKILTERGYSFTTTAEREIVRDIKE 750
T +L +L E + ++ + DI E
Sbjct: 232 TQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = +1
Query: 307 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKA 450
L YPI+ G+ D D+ +I+ ++ + L++ + + V+ L +
Sbjct: 198 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRV 257
Query: 451 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 630
EK+ I+F + + +++ + + +G + V+D G + + EG +P++
Sbjct: 258 YVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNS 317
Query: 631 ILRLDLAGRDLTDYLMKILTERGYSF 708
++++ G D+T MK+L + +
Sbjct: 318 RIKINYGGDDITLLFMKLLMRSHFPY 343
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 376 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 519
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.19
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 175 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 318
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.19
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 500 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 634
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 497 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPYPSTRDTHSPTPS 634
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +2
Query: 497 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPYPSTRDTHSPTPS 634
PP +P P P VPP S P A + P P P+ + P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 497 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPYPSTRDTHSPTPS 634
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.77
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 476 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPYPSTRDTHSPTPS 634
C+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 476 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPYPSTRDTHSPTPS 634
C+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +2
Query: 488 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPYPSTRDTHSPTPS 634
ST P T S S P VPP S T + PT ST SP P+
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 275 SPTYESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 159
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 479 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWT-WPV 655
S+H + +PS + P+ P ++ W P T PT P + + + P + PV
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMT-QPTFQPPSANVYQPASNANQVITPV 302
Query: 656 AIS 664
+IS
Sbjct: 303 SIS 305
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 418 LLTEAPLNPKANREKMTQIMFETFN 492
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 521 PCSRCTRPVVPPVSCWTPATVSPTPYPST 607
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 503 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVAIS 664
C +PS+ C + PV + T S TP P+T + +PTP+ T A S
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTSTTTTAQS 875
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 497 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPS 604
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 169 NRPCTYRSHCLLPTRQLP 116
NRP YRSH + TR+ P
Sbjct: 323 NRPSNYRSHSSMGTRRSP 340
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 273 TYVRVLLSHTDHHALMAGPSDDRGEYGARSIISCETGLAHTG 148
TY +LL D + + G +DR + + + + C L H+G
Sbjct: 226 TYPSLLLEEWDRYLMQNGSENDRPDSYSSTQLYCVLCLDHSG 267
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 699 AALGEDLHEVVCEIATGQVQTQDGVGECVSLVD 601
AA G+ + C++A+G Q+G + +S+V+
Sbjct: 402 AAAGKFFSQHSCDLASGNKSAQEGQNQFLSMVE 434
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 537 RVRSYHRYRAGLRRRCLPHRTHL 605
R RS HR+ G RR P+RTHL
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHL 162
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 312 FEGQDTSFALCLVTYVRVLLSHTDHHA 232
+EG+DT+ Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 432 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 581
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 9.4
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +2
Query: 515 SKPCSRCTRPVVPPVSCWT---PATVSPTPYPSTRDT-HSPTPSCVWTWPV 655
S+ S T P PP + T PA SP P P +T H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPP-PKVGETYHPPTASGTRVPPV 948
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,348,797
Number of Sequences: 5004
Number of extensions: 75503
Number of successful extensions: 290
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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