Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_C13
         (410 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1G9M5 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_Q2S6C6 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_A3Z5B1 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  

>UniRef50_A1G9M5 Cluster: Putative uncharacterized protein; n=1;
            Salinispora arenicola CNS205|Rep: Putative
            uncharacterized protein - Salinispora arenicola CNS205
          Length = 1455

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -1

Query: 98   VPVGAPPPRHREAPNTXLXMT 36
            VP G PPPRHR AP   L M+
Sbjct: 1163 VPPGCPPPRHRPAPPPTLAMS 1183


>UniRef50_Q2S6C6 Cluster: Putative uncharacterized protein; n=1;
           Salinibacter ruber DSM 13855|Rep: Putative
           uncharacterized protein - Salinibacter ruber (strain DSM
           13855)
          Length = 276

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +1

Query: 4   GALKQTLVSVXVIXSXVLGASRWRGGGAPTGTAFTNLYVYLNQTMSLTRYRGGPPPHSRG 183
           G +  TL+ + +I +  +G+S WRGGG     A T+        + +  + GG      G
Sbjct: 189 GGVSTTLIYIFLIFAYFIGSSLWRGGGGNKKGAKTS--TRRRGDLPIFIWGGGGSHGGGG 246

Query: 184 VGGG 195
            GGG
Sbjct: 247 FGGG 250


>UniRef50_A3Z5B1 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. RS9917|Rep: Putative uncharacterized
           protein - Synechococcus sp. RS9917
          Length = 207

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +1

Query: 37  VIXSXVLGASRWRGGGAPTGTAFTNLYVYLNQTMSLTRYRGGPPP 171
           VI + V+GAS WR   AP   A T +     Q + L+R  GG  P
Sbjct: 23  VIHAVVIGASSWRSRAAPPAAAAT-VVDNTRQLVRLSRRLGGQEP 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,500,128
Number of Sequences: 1657284
Number of extensions: 4367773
Number of successful extensions: 11712
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11706
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)