BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_C05
(853 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding prot... 181 3e-47
>AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding protein
protein.
Length = 108
Score = 181 bits (440), Expect = 3e-47
Identities = 79/108 (73%), Positives = 95/108 (87%)
Frame = +1
Query: 127 MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 306
MGV + I+ G+ +T+PKPGQT VVHYTGTL +G FDSSR RG+PFKF++GKG+VI+GW
Sbjct: 1 MGVQIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGW 60
Query: 307 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE 450
D+G+A+MSVG+RAKL CSPD+AYGSRGHPGVIPPNA L FDVELLRVE
Sbjct: 61 DEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,937
Number of Sequences: 2352
Number of extensions: 16163
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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