Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B23
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 58 1e-08
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 55 7e-08
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 54 2e-07
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 49 3e-06
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 41 9e-04
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 41 9e-04
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 39 0.004
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 39 0.004
06_01_0825 + 6233525-6233740,6234274-6234461,6234544-6234668,623... 31 0.73
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 28 6.8
05_06_0249 + 26678486-26679270,26679330-26679891,26679930-266800... 28 9.0
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C HC + P + +L S F IA+VDC H +C + ++GYPT+ +F K + P
Sbjct: 30 CGHCKKLAPEYEKLGASFKKAKSVF-IAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEP 88
Query: 657 VEYQGTRDLPSLTLFLS 707
+Y+G R +L F++
Sbjct: 89 KKYEGQRSAEALAEFVN 105
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C HC PI+ +LA + D IA +D H L + ++GYPTL +F K
Sbjct: 149 CGHCKHLAPIYEKLASVYKLDDG-VVIANLDADKHKDLAEKYGVSGYPTLKFFPKGNKAG 207
Query: 657 VEYQGTRDLPSLTLFLSEAFSVKTEGK 737
+Y G R+L F++E + K
Sbjct: 208 EDYDGGRELDDFVKFINEKCGTSRDTK 234
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C HC + P + +L K IA+VDC H +C + ++GYPT+ +F K + P
Sbjct: 59 CGHCKKLAPEYEKLGASFK-KAKSVLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEP 117
Query: 657 VEYQGTRDLPSLTLFL-SEA 713
+Y+G R +L ++ SEA
Sbjct: 118 KKYEGQRTAEALAEYVNSEA 137
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C HC PI+ +LA V +D IA +D H L + ++G+PTL +F K
Sbjct: 178 CGHCKHLAPIYEKLAS-VYKQDEGVVIANLDADKHTALAEKYGVSGFPTLKFFPKGNKAG 236
Query: 657 VEYQGTRDLPSLTLFLSEAFSVKTEGK 737
+Y G R+L F++E + K
Sbjct: 237 EDYDGGRELDDFVKFINEKCGTSRDSK 263
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C+HC +W +L +++ D + I QVDC V +C + +I YPT F++
Sbjct: 70 CKHCKNLGTLWEDLGKVMEGAD-EIEIGQVDCGVSKPVCSKVDIHSYPTFKVFYEGE-EV 127
Query: 657 VEYQGTRDLPSLTLFLSEAFSVKTEGK 737
+Y+G R++ SL F+S+ E K
Sbjct: 128 AKYKGPRNVESLKNFVSDEAEKAGEAK 154
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C HC + PIW + A ++ +A +D H +L E I G+PT+ F P
Sbjct: 59 CGHCQQLTPIWEKAAGVLK---GVATVAALDADAHKELAQEYGIRGFPTIKVFVPGK-PP 114
Query: 657 VEYQGTRDLPSLTLF 701
V+YQG RD+ + F
Sbjct: 115 VDYQGARDVKPIVEF 129
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 15/124 (12%)
Frame = +3
Query: 384 EPLIEIE-NTKITAKLPFKTKDLNALNKNELMCRHCTEFYPIWSELAELVNTKDSKFAIA 560
EP IE N++ KL K+KDL + C HC + P W + A+ N K + +
Sbjct: 163 EPSASIELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKAAK--NLK-GQVKLG 219
Query: 561 QVDCTV--------------HAKLCHENEITGYPTLFYFHKNTFTPVEYQGTRDLPSLTL 698
VDC + L + ++ G+PT+ F + +P YQG R ++
Sbjct: 220 HVDCDAEKNTNSSVWSVDKSYRSLMSKYKVEGFPTILVFGADKESPFPYQGARVASAIES 279
Query: 699 FLSE 710
F E
Sbjct: 280 FALE 283
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 243 SSVYEYNPSNFKFQIEEMDGNFIM-FYAPC*PKCKWYTVV 359
S V ++NP+NFK ++ +G ++ F+AP C+ T +
Sbjct: 29 SPVLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQLTPI 68
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCT--VHAKLCHENEITGYPTLFYFHKNTF 650
C HC + P + + A+ ++ D +A+VD + L + EI G+PTL F
Sbjct: 69 CGHCKKLAPEYEKAAQELSKHDPPIVLAKVDANDEKNKPLATKYEIQGFPTLKIFRNQGK 128
Query: 651 TPVEYQGTRDLPSLTLFLSE 710
EY+G R+ + +L +
Sbjct: 129 NIQEYKGPREAEGIVEYLKK 148
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 656
C HC + PI E A + + D IA++D T + + E ++ GYPTL YF +
Sbjct: 414 CGHCKKLAPILDEAATTLKS-DKDVVIAKMDATAN-DVPSEFDVQGYPTL-YFVTPSGKM 470
Query: 657 VEYQGTRDLPSLTLFLSE 710
V Y+ R + F+ +
Sbjct: 471 VPYESGRTADEIVDFIKK 488
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTK-----DSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHK 641
C P W + A+++ + D + +A+VDCT LC + I GYP++ F K
Sbjct: 181 CYWSNRLKPSWEKTAKIMRERYDPEMDGRIILAKVDCTEEIDLCRRHHIQGYPSIRIFRK 240
Query: 642 NTFTPVEYQGTRD 680
+ E QG D
Sbjct: 241 GSDLK-ENQGHHD 252
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCT--VHAKLCHENEITGYPTLFYFHKNTF 650
C HC + P + A + + D +A+VD + ++ L E+ + GYPT+
Sbjct: 54 CGHCNQLAPEYEAAAAALRSHDPPVVLAKVDASADLNRGLAGEHGVQGYPTIRILRDRGA 113
Query: 651 TPVEYQGTRDLPSLTLFL 704
Y G RD + +L
Sbjct: 114 RSHNYAGPRDAAGIVAYL 131
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYF--HKNTF 650
C HC E P +++L + + DS IA++D T + + G+PT+ ++ K +F
Sbjct: 458 CGHCQELEPTYNKLGKHLRGIDS-LVIAKMDGTANEH--PRAKPDGFPTILFYPAGKKSF 514
Query: 651 TPVEYQGTRDLPSLTLFLSEAFSV 722
P+ ++G R + + F+ + S+
Sbjct: 515 EPITFEGDRTVVEMYKFIKKHASI 538
>06_01_0825 +
6233525-6233740,6234274-6234461,6234544-6234668,
6234858-6234917,6235043-6235074
Length = 206
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 555 IAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTPVEYQGTRDLPSLTLFLSEAFSV 722
+A + TV + + I GYPTLF N+ V Y G R + SL F ++ +
Sbjct: 125 LAIEESTVRLRTRYRYGIHGYPTLFLI--NSTVRVRYHGPRTVKSLAAFYNDVSGI 178
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +3
Query: 477 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNT 647
C + P ++E A + S A A++D + K + G+PT+ F T
Sbjct: 97 CERSAQLMPRFAEAAAALRAMGSAVAFAKLDGERYPKAASAVGVKGFPTVLLFVNGT 153
>05_06_0249 +
26678486-26679270,26679330-26679891,26679930-26680049,
26680296-26680382
Length = 517
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 481 DIAQNFIRYGQNWQSWLIPRTPNLPLPKLT 570
DI IR+ ++ W P P+L LPKLT
Sbjct: 339 DITDQVIRF-TGYERWFRPSCPSLLLPKLT 367
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,946,431
Number of Sequences: 37544
Number of extensions: 381170
Number of successful extensions: 771
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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