Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B23
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 578 HCAVNLGNGKFGVL 537
           HCA  +G G++G++
Sbjct: 595 HCAEEIGRGQYGIV 608


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 578 HCAVNLGNGKFGVL 537
           HCA  +G G++G++
Sbjct: 633 HCAEEIGRGQYGIV 646


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 544 PNLPLPKLTAQCMLSFVMKMK*QVIQHYFIST 639
           P  P+P +T+ C+ S    +K     HY + T
Sbjct: 181 PEPPVPTVTSACVGSAYTPLKEDHDDHYGVPT 212


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 231 APEQSSVYEYNPSNFKF-QIEEMDGNFIMFY 320
           APE  ++++Y PS+ +  ++   D  F   Y
Sbjct: 408 APEVENIWDYTPSSLELGEVAVHDPVFYQLY 438


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 30  KAKYPTNTKLFV 65
           +A+YPTN  LF+
Sbjct: 128 RAEYPTNRSLFI 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,211
Number of Sequences: 438
Number of extensions: 4626
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)