Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B20
         (841 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.87 
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              24   1.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   8.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.1  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 217 WHKILKVDMIYGE-KQFDEQHEVDATFLK 134
           W+ IL++ ++YGE    DE  E+ + + K
Sbjct: 13  WYLILQIALVYGEISDIDEFREMTSKYRK 41


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -2

Query: 684 ADCRVPVSRYGSYLCDFFGCCNGFRHSFKFLFNG 583
           AD RV      +Y C   G C    H+ K+   G
Sbjct: 61  ADGRVSCPVLRAYTCPICGACGDIAHTVKYCPKG 94


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 648 YLCDFFGCCNGFRHS 604
           ++  FFGCC   R S
Sbjct: 63  FVISFFGCCGAIRES 77


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 386 TPLATVTPSFVIFGDPQ 336
           +P A + P  V++G+PQ
Sbjct: 98  SPSAALQPQHVVYGNPQ 114


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 735 CDYSIXTYLLHCISNELADCRVPVSRY 655
           CD  +   +L C ++ L+ C + + RY
Sbjct: 111 CDSWVSLDILLCTASILSLCAISIDRY 137


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 648 YLCDFFGCCNGFRHSFKFLFNGIYGE 571
           Y CD  G   G+ H  K      YGE
Sbjct: 232 YTCDICGKSFGYNHVLKLHQVAHYGE 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,734
Number of Sequences: 438
Number of extensions: 4459
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)