Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B15
(787 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 44 2e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.007
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 35 0.015
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 34 0.027
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 32 0.11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 31 0.25
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.57
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 26 0.71
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.76
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 28 1.3
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 28 1.3
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 27 2.3
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 26 5.3
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 5.3
SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|... 26 7.0
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 25 9.3
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 25 9.3
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 44.0 bits (99), Expect = 2e-05
Identities = 30/97 (30%), Positives = 40/97 (41%)
Frame = +3
Query: 456 RQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXX 635
R G G+YRGY +A Y+P + WW Y + L K S +S + C A
Sbjct: 128 RSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICSA--LGTV 185
Query: 636 XXXXXXNPLXIVRAXLQVEGVGTMXQVFXXLWAEEGL 746
PL IV+ QV M + L AE+ L
Sbjct: 186 VATTISTPLDIVKTRYQVATSSAMRKAEYGLQAEKEL 222
Score = 33.1 bits (72), Expect = 0.046
Identities = 21/94 (22%), Positives = 35/94 (37%)
Frame = +3
Query: 477 YYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXXXXXXXXN 656
YYRG SL P + L+ + Y + + P ++ +
Sbjct: 46 YYRGLPISLTLITPATCLYLSTYV---EAKRRFKPSVGEGAILYSICGMTAEVVSSFVWT 102
Query: 657 PLXIVRAXLQVEGVGTMXQVFXXLWAEEGLFGLY 758
PL +++A Q+ G++ L EGL G Y
Sbjct: 103 PLEVIKARTQISQKGSVINTISTLARSEGLKGFY 136
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.9 bits (79), Expect = 0.007
Identities = 27/105 (25%), Positives = 49/105 (46%)
Frame = +3
Query: 231 DISPKWKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRTGGVSTTINPLGIDLDKR 410
D++ K F+GG I+GQT+ P DVL + V + GI + +
Sbjct: 223 DLTAFQKLFLGG-FTGIIGQTLTFPADVLRRRFQVNRIP--------------GIGHNYK 267
Query: 411 RSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 545
K+A+ +Y+ G G++RGY++++ +P ++ W Y
Sbjct: 268 NIKSAI-----FHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTY 307
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 34.7 bits (76), Expect = 0.015
Identities = 23/99 (23%), Positives = 40/99 (40%)
Frame = +3
Query: 249 KSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRTGGVSTTINPLGIDLDKRRSKAAL 428
K I GG A + ++ P DV+ GG +T + LG L R+
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMV--LGGTLSSMRT---- 60
Query: 429 AREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 545
++ G G YRG + Y+P+ ++++ +Y
Sbjct: 61 -------IFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVY 92
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.9 bits (74), Expect = 0.027
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Frame = +3
Query: 393 IDLDKRRSKAALAR---EVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDE 563
+ LDK+ +AA R + ++ R G G Y+G +ASL V S L W LY ++
Sbjct: 190 LQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLG-VGESTLQWVLYEKFKHA 248
Query: 564 L----LKISPVWVSHLLIQCVAXXXXXXXXXXXXN--------PLXIVRAXL-QVEGV-G 701
+ L+ + + + V P +VR L Q + G
Sbjct: 249 VAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLRQSPSING 308
Query: 702 T-----MXQVFXXLWAEEGLFGLYAKGLSARLV 785
T + Q F +W E+G+ GLY GL+A L+
Sbjct: 309 TPKYTGLIQCFKLVWMEQGIVGLYG-GLTAHLL 340
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 450 VYRQHGPLGYYRGYTASLAAYVPNSALWWALY 545
V+ + G +G Y G TA L VPN+ + + Y
Sbjct: 322 VWMEQGIVGLYGGLTAHLLRVVPNACILFGSY 353
Score = 25.8 bits (54), Expect = 7.0
Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 8/190 (4%)
Frame = +3
Query: 240 PKWKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGR-TGGVSTTINPLGIDLDKRRS 416
P FI GG A ++G P DV+ L K R + + +PL
Sbjct: 47 PPLSHFIAGGVAGMLGAIATAPLDVVKTRLQ-SDFYKDRFLKQTAKSKSPLTAAYRHFMD 105
Query: 417 KAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSH 596
+ + V V G +RG +L +P ++ + Y + L + +
Sbjct: 106 TCIILKNVKV----HEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQEN 161
Query: 597 LLIQCVAXXXXXXXXXXXXNPLXIVRAXLQVE---GVGTMXQVFXXLWAE----EGLFGL 755
I +A NP+ +V+ LQ++ G + + EG GL
Sbjct: 162 SQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGL 221
Query: 756 YAKGLSARLV 785
Y KGLSA L+
Sbjct: 222 Y-KGLSASLL 230
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.9 bits (69), Expect = 0.11
Identities = 43/183 (23%), Positives = 65/183 (35%), Gaps = 2/183 (1%)
Frame = +3
Query: 174 SGVFYISTYEGVXFELGKYDISPK--WKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLV 347
S Y S E F K + SP S + G CA + + PFDV+ Q +
Sbjct: 91 SHAIYFSVLE---FFKSKINASPDRPLASALAGACAITISDAFMTPFDVIKQRM------ 141
Query: 348 KGRTGGVSTTINPLGIDLDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSA 527
L R+ K+AL A V+R G +Y Y +A +P +A
Sbjct: 142 ----------------QLPSRKYKSAL--HCATTVFRNEGLGAFYISYPTCIAMSIPFTA 183
Query: 528 LWWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXXXXXXXXNPLXIVRAXLQVEGVGTM 707
+ A Y L +P V ++ PL +V+ LQ G ++
Sbjct: 184 IQVATYDTCMSFL---NPNAVYDPTSHIISGGLSGAIASSLTTPLDVVKTLLQTRGSSSI 240
Query: 708 XQV 716
+V
Sbjct: 241 PEV 243
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 30.7 bits (66), Expect = 0.25
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 246 WKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRT 359
W + G A + GQT+ PF+V + + + G+ K ++
Sbjct: 237 WPELLCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKS 274
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 450 VYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLK 572
+Y +G G Y+G+TA+L P + + + Y + L++
Sbjct: 69 IYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIR 109
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.57
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 240 PKWKSFIGGGCASIVGQTIIVPFDVLSQHLMV 335
P W + GG +S++ + +I PFDV+ + +
Sbjct: 15 PVWHYTLAGGISSVICRFMIAPFDVIKIRMQI 46
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 432 REVAVRVYRQHGPLGYYRGYTASLAAYVPN--SALWWALYTAY 554
++ + +YR G G YRG + S+ P LW + + Y
Sbjct: 231 KDCFLSIYRNSGIKGLYRGLSVSMLKVAPGRYECLWLSCHFYY 273
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.8 bits (54), Expect(2) = 0.71
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 435 EVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 545
+ A +Y + G G+YRG+ L P +A+ + +Y
Sbjct: 256 QCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVTFYVY 292
Score = 21.8 bits (44), Expect(2) = 0.71
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 237 SPKWKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRT 359
+P WK + G A PFD++ + G + T
Sbjct: 210 TPGWKLCVFGAGAGYAMWLAAYPFDIVKSKIQTDGFLSKAT 250
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.1 bits (62), Expect = 0.76
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 399 LDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 545
L RS + ++ +R G LG+Y+G+ L VP + + + +Y
Sbjct: 214 LQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVY 262
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -2
Query: 573 SSKVHPGTPCT--EPTTAPSWARRPPGTP-CNPC 481
++ +P CT + T P W R P G P CN C
Sbjct: 626 ANATNPTPTCTNCQTRTTPLWRRSPDGQPLCNAC 659
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3
Query: 195 TYEGVXFELGKYDISPKWK---SFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRTG 362
TYE + LG S S++ GG A V Q I P D L + L +G+ G
Sbjct: 209 TYEAMKRVLGISSSSENHSPLYSYLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQHG 267
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 435 EVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELL 569
+V + YR G G YRG+ S+ V L++ +Y + +L
Sbjct: 180 DVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVL 224
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 357 SYPSPGLAPSGAGSARQT 304
S P G +PSGA SARQT
Sbjct: 131 SSPYGGYSPSGASSARQT 148
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 492 TASLAAYVPNSALWWALYTAYQDELLKIS 578
+A+L+ Y+ +A+WWA+ T E++ ++
Sbjct: 76 SAALSFYLDTNAVWWAIRTITHLEIVGLN 104
>SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 584
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 246 WKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLV 347
+KS GG + +G +P VL ++LGL+
Sbjct: 480 YKSTFGGSLSQWIGWLCALPISVLFSVFVILGLI 513
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +3
Query: 390 GIDLDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWAL--YTAYQDE 563
GI +D+R + + ++A++ H PL + Y S N L W A D
Sbjct: 684 GITVDERGNSKLIEYDIALQPVSFHHPLHWLLVYLLSFYVERDNYKLLWTQLDLLAVTDH 743
Query: 564 LLKISPVWVSHL 599
L++ W+S +
Sbjct: 744 PLRVC-AWLSQM 754
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 706 IVPTPSTCNXALTMXRGLVSIVVVKPPRVPATHCISRCDT-HTGDIFKSSSW 554
IVP S + A + +G+V + V P +SRC H ++ S W
Sbjct: 365 IVPPSSNDSDAELLLKGVVRVENVSNPEAYIPTVLSRCKVKHLERTYEISGW 416
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,868,413
Number of Sequences: 5004
Number of extensions: 53981
Number of successful extensions: 172
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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