Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B14
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   8.1  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 553 RNGDDCISYCCSKICFSGLSHFY 485
           R  D C+ Y    I +S LS FY
Sbjct: 331 RTPDQCLFYNTDFIIYSSLSSFY 353


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 307 ITRVECYLIFSSITNESLC 251
           +T+VECY  + +I   ++C
Sbjct: 318 LTQVECYKYYGNIMVNAMC 336


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 522 QQYEMQSSPFLLILTIHSVRPQK 590
           +QY +   PF   +TI++ +P K
Sbjct: 491 RQYRLNHKPFNFHITINADKPMK 513


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 522 QQYEMQSSPFLLILTIHSVRPQK 590
           +QY +   PF   +TI++ +P K
Sbjct: 491 RQYRLNHKPFNFHITINADKPMK 513


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 127 CYRDRSWN 150
           CY DR+WN
Sbjct: 767 CYNDRTWN 774


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 572 QRQATKDAGAIAGLNVLRIINEPTAAALAYG 664
           Q +A K A  +   N   II+EPT     YG
Sbjct: 353 QAEAEKHAAMLYQYNFNIIISEPTERISPYG 383


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 442 NKTFCT*GNQQYGVNKNERDR*SISWNSNTRC 537
           NKT     N +Y  N N  +  + + N N  C
Sbjct: 320 NKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNC 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,473
Number of Sequences: 438
Number of extensions: 5497
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)