Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B12
(863 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 291 6e-80
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 61 2e-10
SPBC4B4.09 |usp105|prp39|U1 snRNP-associated protein Usp105|Schi... 49 1e-06
SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos... 47 3e-06
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 45 1e-05
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 43 6e-05
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 35 0.013
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 31 0.16
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 31 0.21
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 29 1.1
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 28 1.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 2.0
SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1 |Schi... 27 2.6
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 3.4
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 27 4.5
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 27 4.5
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 27 4.5
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 27 4.5
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 26 7.9
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 26 7.9
SPAC22A12.13 |mug84||pig-P |Schizosaccharomyces pombe|chr 1|||Ma... 26 7.9
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 26 7.9
SPACUNK4.09 |||conserved protein|Schizosaccharomyces pombe|chr 1... 26 7.9
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 7.9
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 291 bits (715), Expect = 6e-80
Identities = 131/220 (59%), Positives = 166/220 (75%)
Frame = +1
Query: 196 IQITAEQLLREAKERDLEILPPPPKQKISDPEELRDYQHRKRKAFEDNIRKNRLVIGNWL 375
IQI+AEQLLREA ER ++ PPK I+D EEL+++Q RKRK FED IR+NRL +G+W+
Sbjct: 16 IQISAEQLLREAVERQ-DVAFVPPKINITDLEELQEFQGRKRKEFEDAIRRNRLAMGHWM 74
Query: 376 KYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTIL 555
+Y QWE QK+ RARS++ERALDVD + LWLKY E EM+NR +NHARNL+DRAVT L
Sbjct: 75 RYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQL 134
Query: 556 PRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERARQIY 735
PRV + WYKY YMEEML N+ G RQVFERW++W PDE W +YI E RY E ERAR IY
Sbjct: 135 PRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENCWMSYIRMERRYHENERARGIY 194
Query: 736 EQFVMVHPDVKNWIKYAKFEXNHGFINGSRTVFXRAVESL 855
E+FV+VHP+V NW+++A+FE G R V+ A+++L
Sbjct: 195 ERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDAL 234
Score = 77.4 bits (182), Expect = 2e-15
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Frame = +1
Query: 313 RKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEM 492
R R FE + + I WLKY + E + I AR++++RA+ R LW KY M
Sbjct: 88 RARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYM 147
Query: 493 EMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQA 672
E + R +++R + P W Y ME AR ++ER++ HP+
Sbjct: 148 EEMLGNITGCRQVFERWLKWEPD-ENCWMSYIRMERRYHENERARGIYERFVVVHPEVTN 206
Query: 673 WQTYINFELRYKELERARQIYEQFV-MVHPDVKN---WIKYAKFEXNHGFINGSRTVFXR 840
W + FE RQ+Y + + + N +I +AKFE +RT+F
Sbjct: 207 WLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERARTIFKY 266
Query: 841 AVE 849
A++
Sbjct: 267 AID 269
Score = 76.2 bits (179), Expect = 6e-15
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Frame = +1
Query: 268 KQKISDPEELRDYQHRKRKAFEDNIRKN--RLVIGNWLKYAQWEESQ-KQIQRARSIYER 438
++ D +R+ + + + KN R + WL Y +EE K + RAR +Y+
Sbjct: 329 EESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEIDVKDVDRARKVYQE 388
Query: 439 ALD-VDHRNVT---LWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEML 606
AL + H+ T LWL Y E+R R+++ AR RA+ + P+ F Y E+ +
Sbjct: 389 ALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKLF-RGYIEFEDAI 447
Query: 607 ENVAGARQVFERWMEWHPDEQA-WQTYINFELRYKELERARQIY----EQFVMVHPDVKN 771
+ R ++E+W+ + P+ A W Y E + + +RAR +Y Q ++ P++
Sbjct: 448 KQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVNQPILETPELV- 506
Query: 772 WIKYAKFEXNHGFINGSRTVFXRAVES 852
W Y FE +R+++ + + +
Sbjct: 507 WKAYIDFEFEEMEYGKARSIYQQLLRT 533
Score = 76.2 bits (179), Expect = 6e-15
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
WL YA +E Q++I AR RAL + + L+ Y E E +Q + R L+++ +
Sbjct: 404 WLMYAMFELRQRKIDVARKTLGRALGMCPKP-KLFRGYIEFEDAIKQFDRCRILYEKWIL 462
Query: 550 ILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEW---HPDEQAWQTYINFELRYKELER 720
P W Y +E L + AR ++ + E W+ YI+FE E +
Sbjct: 463 YDPEACAPWLGYAALETKLGDSDRARALYNLAVNQPILETPELVWKAYIDFEFEEMEYGK 522
Query: 721 ARQIYEQFVMVHPDVKNWIKYAKFEXNH 804
AR IY+Q + P VK WI +A FE H
Sbjct: 523 ARSIYQQLLRTAPHVKVWISFANFEIAH 550
Score = 72.1 bits (169), Expect = 9e-14
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Frame = +1
Query: 298 RDYQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWL 477
R+ H R F+ + + V W KY EE I R ++ER L + + W+
Sbjct: 118 RNINHA-RNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEP-DENCWM 175
Query: 478 KYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVF----ERW 645
Y ME R + AR +++R V + P V+ W ++ EE N A RQV+ +
Sbjct: 176 SYIRMERRYHENERARGIYERFVVVHPEVTN-WLRWARFEEECGNAANVRQVYLAAIDAL 234
Query: 646 MEWHPDEQAWQTYINFELRYKELERARQIYEQFVMVHPDVKN---WIKYAKFEXNHG 807
+ +E+ + + FE+R KE ERAR I++ + P K+ + +Y FE G
Sbjct: 235 GQEFLNERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFG 291
Score = 71.3 bits (167), Expect = 2e-13
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Frame = +1
Query: 313 RKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERAL----DVDHRN-----V 465
++R +E ++ + WL + EES I R YE+A+ +V +N V
Sbjct: 303 KRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYV 362
Query: 466 TLWLKYTEM-EMRNRQVNHARNLWDRAVTILPR----VSQFWYKYTYMEEMLENVAGARQ 630
+WL Y E+ + V+ AR ++ A+ ++P ++ W Y E + AR+
Sbjct: 363 YIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARK 422
Query: 631 VFERWMEWHPDEQAWQTYINFELRYKELERARQIYEQFVMVHPDV-KNWIKYAKFEXNHG 807
R + P + ++ YI FE K+ +R R +YE++++ P+ W+ YA E G
Sbjct: 423 TLGRALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLG 482
Query: 808 FINGSRTVFXRAVESLVM 861
+ +R ++ AV ++
Sbjct: 483 DSDRARALYNLAVNQPIL 500
Score = 54.4 bits (125), Expect = 2e-08
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 379 YAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT--I 552
Y ++E++ KQ R R +YE+ + D WL Y +E + + AR L++ AV I
Sbjct: 440 YIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVNQPI 499
Query: 553 LPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKE 711
L W Y E AR ++++ + P + W ++ NFE+ + E
Sbjct: 500 LETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVWISFANFEIAHLE 552
Score = 46.0 bits (104), Expect = 7e-06
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Frame = +1
Query: 409 IQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQ------ 570
+ + R YE+ L + WL ++E +N R +++A+ +P V +
Sbjct: 301 LDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRR 360
Query: 571 ---FWYKYTYMEEM-LENVAGARQVFERWMEWHPDE-----QAWQTYINFELRYKELERA 723
W Y EE+ +++V AR+V++ ++ P + + W Y FELR ++++ A
Sbjct: 361 YVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVA 420
Query: 724 RQIYEQFVMVHPDVKNWIKYAKFE 795
R+ + + + P K + Y +FE
Sbjct: 421 RKTLGRALGMCPKPKLFRGYIEFE 444
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 60.9 bits (141), Expect = 2e-10
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
WL AQ ++K I AR+++ +L V ++ LWL+ E+E ++ ++AV
Sbjct: 513 WLDDAQSFIARKCIDCARAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVE 572
Query: 550 ILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPD-EQAWQTYINFELRYKELERAR 726
P+ W Y + + ++AGAR + R E++ + E+ W + E E ERAR
Sbjct: 573 SCPKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERAR 632
Query: 727 QIYEQFVMVHPDVKNWIKYAKFE 795
++ + + + W K E
Sbjct: 633 KLLARARIESGTERIWTKSISLE 655
Score = 46.8 bits (106), Expect = 4e-06
Identities = 31/130 (23%), Positives = 54/130 (41%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
WL+ + E+ + SI E+A++ + LWL Y + + ARN+ RA
Sbjct: 547 WLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFE 606
Query: 550 ILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERARQ 729
+ W +E + AR++ R E+ W I+ E E +RA Q
Sbjct: 607 YNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTERIWTKSISLERILDEKDRALQ 666
Query: 730 IYEQFVMVHP 759
+ E + ++P
Sbjct: 667 LLENALKIYP 676
Score = 44.4 bits (100), Expect = 2e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
WL A+ EE Q I RAR +++RA + +N LWL+ +ME+R ++ R +A+
Sbjct: 716 WLLLAKLEEKQSVI-RARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQ 774
Query: 550 ILPRVSQFWYKYTYME 597
P W + ++E
Sbjct: 775 ECPSSGLLWTEAIWLE 790
Score = 43.6 bits (98), Expect = 4e-05
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Frame = +1
Query: 313 RKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEM 492
+ RK + I N W+ A+ EE ++ +A+S+ + + R+ +WL+
Sbjct: 262 KARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLE---- 317
Query: 493 EMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVA-GARQVFERWMEWHPDE- 666
+R A+ + AV LP+ W + E LEN A +++ ++ +E++P
Sbjct: 318 AIRLHPAAEAKVIIANAVKKLPKSVTLWLE----AEKLENQAQHKKRIIKKALEFNPTSV 373
Query: 667 QAWQTYINFELRYKELERARQIYEQFVMVHP-DVKNWIKYAKFE 795
W+ +N E +E++ AR + + V + P + W+ A+ E
Sbjct: 374 SLWKEAVNLE---EEVDNARILLARAVELIPMSIDLWLALARLE 414
Score = 35.9 bits (79), Expect = 0.007
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 10/170 (5%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERAL-DVDHRNVTL----WLKYTEMEMRNRQVNHARNLW 534
W+ A+ EE Q + R I R + ++ L WL E V A+ +
Sbjct: 437 WIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQRDQWLSEAEKCETEGAVITAQAII 496
Query: 535 DRAVTI-LPRVSQF--WYKYTYMEEMLENVAGARQVFERWMEWHP-DEQAWQTYINFELR 702
+ + + L QF W + + AR VF + +P E+ W + E
Sbjct: 497 NTCLGVGLDEEDQFDTWLDDAQSFIARKCIDCARAVFAFSLRVYPKSEKLWLRAVELEKL 556
Query: 703 YKELERARQIYEQFVMVHPDVKN-WIKYAKFEXNHGFINGSRTVFXRAVE 849
Y E I E+ V P + W+ YAK N I G+R + RA E
Sbjct: 557 YGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFE 606
>SPBC4B4.09 |usp105|prp39|U1 snRNP-associated protein
Usp105|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 48.8 bits (111), Expect = 1e-06
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +1
Query: 319 RKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEM 498
R ++ + K L+ G W KYA +E + + IYER + +V LW Y +M
Sbjct: 58 RSVYDRFLGKYPLLFGYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFKM 117
Query: 499 R-NRQVNHARNLWDRAVTI--LPRVSQ-FWYKYTYMEEMLENVAGARQVFER 642
N N R L+ + + L +S FW KY EE E Q+ ER
Sbjct: 118 ETNGDANEVRELFMQGANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLER 169
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 367 NWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTE-MEMRNRQVNHARNLWDRA 543
NW KY +EE + QR +YER L W +Y M + +N +++RA
Sbjct: 284 NWRKYLDFEEVEGDFQRICHLYERCLITCALYDEFWFRYARWMSAQPDHLNDVSIIYERA 343
Query: 544 VTILPRVSQ--FWYKYTYMEEMLENVAGARQVFE 639
I +S+ +Y EE N+A A+ +++
Sbjct: 344 SCIFASISRPGIRVQYALFEESQGNIASAKAIYQ 377
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 511 VNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDE-QAWQTYI 687
+N R+++DR + P + +W KY E + + ++ER + P W Y
Sbjct: 54 INTLRSVYDRFLGKYPLLFGYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYC 113
Query: 688 NFELRYK-ELERARQIYEQFV-MVHPDVKN---WIKYAKFE 795
F++ + R+++ Q MV D + W KY +FE
Sbjct: 114 AFKMETNGDANEVRELFMQGANMVGLDFLSHPFWDKYLEFE 154
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 430 YERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYT-YMEEML 606
Y ++D + W KY + E +L++R + +FW++Y +M
Sbjct: 271 YFHVKELDEAQLVNWRKYLDFEEVEGDFQRICHLYERCLITCALYDEFWFRYARWMSAQP 330
Query: 607 ENVAGARQVFER 642
+++ ++ER
Sbjct: 331 DHLNDVSIIYER 342
Score = 29.5 bits (63), Expect = 0.64
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 373 LKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRN 504
++YA +EESQ I A++IY+ L N+ L + +E RN
Sbjct: 357 VQYALFEESQGNIASAKAIYQSILTQLPGNLEAVLGWVGLERRN 400
>SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 790
Score = 47.2 bits (107), Expect = 3e-06
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
W+ Y EES I+ R +Y+R ++ + + Y + N + +++R V
Sbjct: 483 WMYYLDLEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYERGVA 542
Query: 550 ILPRVSQFWYKYTYMEEMLENVAG-----ARQVFERWMEWHPDE---QAWQTYINFELRY 705
+ F Y+ + ++ G R +FE+ +E P E + Y +FE ++
Sbjct: 543 LFSYPVAFELWNLYLTKFVKRYQGTHMERTRDLFEQALEGCPPEFSKSIYLLYADFEEKF 602
Query: 706 KELERARQIYEQFVMVHPDVKNWIKY----AKFEXNHGFINGSRTVFXRAVESL 855
+ +R+ I E+ Y K N+G + +RTV+ +A+ESL
Sbjct: 603 GKAKRSISILEKAADKVKTADRLAIYNVLLVKVALNYGVL-ATRTVYEKAIESL 655
Score = 44.8 bits (101), Expect = 2e-05
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Frame = +1
Query: 376 KYAQWEESQKQIQRARSIYERALDVDHRNVT----LWLKYTEMEMRNRQVNHARNLWDRA 543
++A++ E+ ++++R I+E+A V ++ V +W+ + EME+R++ + AR L A
Sbjct: 395 EFARFYENFDDLEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAARKLIGDA 454
Query: 544 VTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERA 723
V PR S ++ +E L + QV H + W Y++ E +E
Sbjct: 455 VH-APRKSHI----SFFDESL-----SPQV-----RLHKSSKIWMYYLDLEESVGTIETT 499
Query: 724 RQIYEQ-FVMVHPDVKNWIKYAKFEXNHGFINGSRTVFXRAV 846
R++Y++ F + + + YA + + S ++ R V
Sbjct: 500 RKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYERGV 541
Score = 39.5 bits (88), Expect = 6e-04
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Frame = +1
Query: 454 HRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQV 633
H++ +W+ Y ++E + R L+DR + Q Y + E + ++
Sbjct: 477 HKSSKIWMYYLDLEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKI 536
Query: 634 FERWM---EWHPDEQAWQTYI-NFELRYK--ELERARQIYEQFVMVHP---DVKNWIKYA 786
+ER + + + W Y+ F RY+ +ER R ++EQ + P ++ YA
Sbjct: 537 YERGVALFSYPVAFELWNLYLTKFVKRYQGTHMERTRDLFEQALEGCPPEFSKSIYLLYA 596
Query: 787 KFEXNHGFINGSRTVFXRAVESL 855
FE G S ++ +A + +
Sbjct: 597 DFEEKFGKAKRSISILEKAADKV 619
Score = 31.1 bits (67), Expect = 0.21
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 430 YERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLE 609
+ER+L + H+ +W Y + M+ V R ++ A+ LP V+Q + + E
Sbjct: 98 FERSLILLHKMPVIWKLYLQFLMKQPNVTKIRCTFNSALRALP-VTQHDDIWDMFTKYAE 156
Query: 610 NVAG--ARQVFERWMEWHPDEQAWQTYINFELRYKELERARQIYEQFV 747
++ G V+ R+++ P +A + YI + A + YE +
Sbjct: 157 DIGGLFCIHVYRRYIQVEP--RAIENYIEILCKLGLWNEAARQYEDIL 202
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +1
Query: 367 NWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAV 546
+W + +Q++ +A Y++A+ D RN T W + + Q A + + RA+
Sbjct: 586 SWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAI 645
Query: 547 TILPRVSQFWYKYTYMEEMLEN-VAGARQVFERWMEWHP 660
+ P +S+ WY + E N ++ A ++R E P
Sbjct: 646 RLNPYISEVWYDLGTLYESCHNQISDALDAYQRAAELDP 684
Score = 44.0 bits (99), Expect = 3e-05
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Frame = +1
Query: 292 ELRDYQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTL 471
EL D Q + A+E +R+N I L+ A +++Q A Y+ LD D + +
Sbjct: 345 ELFDDQDKALSAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDPKQGEI 404
Query: 472 WLKYTEMEMRNRQVNHARNLWDRAVTIL--PRVSQFWYKYTYMEEMLENVAGARQVFERW 645
W + ++ A + + +A+ L P+ + WY + + + A + F +
Sbjct: 405 WSALGHCYLMQDDLSRAYSAYRQALYHLKDPKDPKLWYGIGILYDRYGSHEHAEEAFMQC 464
Query: 646 MEWHPD-EQAWQTYINFELRYKELERARQIYEQF 744
+ P+ E+ + Y + YK+ + Q E F
Sbjct: 465 LRMDPNFEKVNEIYFRLGIIYKQQHKFAQSLELF 498
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 42.7 bits (96), Expect = 6e-05
Identities = 28/135 (20%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +1
Query: 466 TLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWY--KYTYMEEMLENVAGARQVFE 639
++W++Y + N + A L +R++ LP+ K+ +E + R +FE
Sbjct: 1547 SVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRTIFE 1606
Query: 640 RWMEWHPDE-QAWQTYINFELRYKELERARQIYEQFVMVHPDVKN----WIKYAKFEXNH 804
+ +P W I+ E++ + R+++++ + ++ K + K+ +E N
Sbjct: 1607 GLLSSYPKRLDLWNVLIDMEMKQDDPSIVRRLFQRLLALNLSTKKAKFAFKKWLAYEKNI 1666
Query: 805 GFINGSRTVFXRAVE 849
G G+ V RA+E
Sbjct: 1667 GDDEGAEQVKRRAIE 1681
Score = 35.9 bits (79), Expect = 0.007
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 376 KYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDR--AVT 549
K+A E +R R+I+E L + + LW +MEM+ + R L+ R A+
Sbjct: 1587 KFAILEFKNGDPERGRTIFEGLLSSYPKRLDLWNVLIDMEMKQDDPSIVRRLFQRLLALN 1646
Query: 550 ILPRVSQFWY-KYTYMEEMLENVAGARQVFERWMEW 654
+ + ++F + K+ E+ + + GA QV R +E+
Sbjct: 1647 LSTKKAKFAFKKWLAYEKNIGDDEGAEQVKRRAIEY 1682
Score = 28.7 bits (61), Expect = 1.1
Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 6/161 (3%)
Frame = +1
Query: 391 EESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTIL----- 555
E+ +I + +ER L + LW+ Y + ++ AR + RA++ +
Sbjct: 1416 EKDLDEIPSTAADFERQLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRALSTINYREE 1475
Query: 556 PRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERARQIY 735
W +E ++VF+ + ++ ++ +++ A +
Sbjct: 1476 DEKLNVWMALLNLEVAYGTEDSLKEVFKEACAYCDALIVYEKLCGILIKGGKVDLADEYM 1535
Query: 736 EQFVMVHPDVKN-WIKYAKFEXNHGFINGSRTVFXRAVESL 855
+ + V + WI+YA F N+ + + R+++SL
Sbjct: 1536 QLMLKNFKQVPSVWIQYATFLLNNDKAEKAHGLLERSLQSL 1576
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 35.1 bits (77), Expect = 0.013
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 427 IYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEML 606
++ RA + +VTLWL Y + + VN + A+ P ++ W E +
Sbjct: 95 LFLRATNKFFGDVTLWLDYIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSI 154
Query: 607 E-NVAGARQVFERWMEWHPDEQA-WQTYINFELRY 705
NV+ AR + R + + + W Y EL Y
Sbjct: 155 NANVSAARALMNRALRLNQENPVIWAAYFRLELSY 189
Score = 32.7 bits (71), Expect = 0.069
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMR-NRQVNHARNLWDRAV 546
WL Y + + K + I AL N LW+ + E N V+ AR L +RA+
Sbjct: 110 WLDYIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRAL 169
Query: 547 TILPRVSQFWYKYTYME 597
+ W Y +E
Sbjct: 170 RLNQENPVIWAAYFRLE 186
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 409 IQRARSIYERALDVDHRNVTLWLKYTEMEM 498
+ AR++ RAL ++ N +W Y +E+
Sbjct: 158 VSAARALMNRALRLNQENPVIWAAYFRLEL 187
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 31.5 bits (68), Expect = 0.16
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = +1
Query: 268 KQKISDPEELRD---YQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYER 438
K + SDP +L+ Q+R AFE + L WL + S QRA R
Sbjct: 298 KWEQSDPLDLQHGTMLQNRIAYAFEQAMLYVPLCPQIWLDGFSYFLSISDEQRALQTIRR 357
Query: 439 ALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPR-VSQ 570
+ N L ++Y E E N + + R+ ++ + L R +SQ
Sbjct: 358 GMRYCPSNFVLHVRYAEHEEANNRTSEIRSTYESLIAALAREISQ 402
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 31.1 bits (67), Expect = 0.21
Identities = 27/130 (20%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 358 VIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWD 537
+IGN+ Y+ E +K + + ++RAL ++ ++ W + + + A +
Sbjct: 343 IIGNY--YSLLSEHEKAV----TYFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYR 396
Query: 538 RAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHP-DEQAWQTYINFELRYKEL 714
AV + + + WY E+L+ A F+R P D++ WQ N Y+++
Sbjct: 397 LAVDVNRKDYRAWYGLGQTYEVLDMHFYALYYFQRATALRPYDQRMWQALGNC---YEKI 453
Query: 715 ERARQIYEQF 744
+R ++ + +
Sbjct: 454 DRPQEAIKSY 463
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 397 SQKQIQRARSIYERALDVDHRNVTLWLKYTE-MEMRNRQVNHARNLWDRAVTILPRVSQF 573
S ++Q ++YERA+ + LWL+YT + + + A ++ +RA + +
Sbjct: 284 STAELQYITTLYERAIVLYPLIPELWLQYTAWLSKVDFSSSQASSVAERATRNCSWIGRI 343
Query: 574 W-YKYTYM 594
W K TYM
Sbjct: 344 WSIKLTYM 351
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 487 EMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYT-YMEEMLENVAGARQVFER 642
E ++ + L++RA+ + P + + W +YT ++ ++ + + A V ER
Sbjct: 280 ESRRSTAELQYITTLYERAIVLYPLIPELWLQYTAWLSKVDFSSSQASSVAER 332
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 858 HQRFNSSXKNCPRAIYETMVXFKFXIFYPILYIWMHHNKLFIDLSSPFKFFVPQF-KVYV 682
H++ + + N P +I++ + + + Y L + ++ F +S P+KFF F +
Sbjct: 213 HRKSSITLSN-PLSIHDNLSEEELDLLYKQLILSRENDFTFPYISQPWKFFESDFVHIVP 271
Query: 681 CLPSLLIWMPFHPT 640
PS+ W F PT
Sbjct: 272 VSPSIPEW-TFQPT 284
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/50 (20%), Positives = 27/50 (54%)
Frame = +1
Query: 475 LKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGA 624
+ T+++ + + + N+W I +S +Y+ TY++++L +A +
Sbjct: 1516 MNITDLQSKMKIIVKFLNIWKEIQQIWTHLSAIFYESTYIQQLLPELAAS 1565
>SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 117 ERRT*HGQQDNKNAESGKGEEQSTSRNP 200
E T Q+DN +S KG STS NP
Sbjct: 399 ETNTTENQKDNARGQSNKGHGFSTSLNP 426
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 283 DPEELRDYQHRKRKAFEDNIRKNR 354
+P EL RKRK +ED+++K++
Sbjct: 379 EPYELDSNTQRKRKRYEDSLKKSK 402
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 196 IQITAEQLLREAKERDLEILPPPPKQKI 279
I I A++ E K+R+LE++PP K +
Sbjct: 355 IGIEAKKFNNERKKRELEVIPPDVKSAL 382
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 789 FXIFYPILYIWMHHNKLFIDLSSPFKFFVPQFKVYVCLPSLLI 661
+ +FYP LY + N L++ S F + F LP+ LI
Sbjct: 301 YPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLI 343
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 4.5
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 789 FXIFYPILYIWMHH-NKLFIDLSSPFKFFVPQFKVYVCLPSLLIWMPFHPTFKYLSCSSY 613
F FY ++ I H N+L I S + FFV + LLI PTFK L C
Sbjct: 543 FIAFYKLMPIISKHLNELPIIASFDYTFFVR-----IIWSLLLISFLSKPTFKQLRCQLS 597
Query: 612 IF 607
+F
Sbjct: 598 LF 599
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/111 (21%), Positives = 47/111 (42%)
Frame = +1
Query: 331 EDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQ 510
ED+I RL + YA+ ES+ ++ + Y L R+ +Y M+ +
Sbjct: 54 EDSISYYRLDVAKKSVYAE-SESKLPLKMKKG-YSVHLKDQSRDALTDYRYKSMKGIYSE 111
Query: 511 VNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPD 663
N +LW++ ++P ++ Y+ + +M N W++ PD
Sbjct: 112 ANSPADLWEQEAIVIPDITDKETIYS-LGKMSYNAYQKIPFDGDWLDLGPD 161
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 537 QSCYNSAKSISVLVQIYLHGGNVGKC 614
++CY SAK+I L L G + KC
Sbjct: 664 ETCYESAKAIVQLSSKLLSAGQMDKC 689
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 242 TLRYYHRHLNRKYLILRNFETTNIVNVK 325
TL Y+H L+ K+L R + IV K
Sbjct: 32 TLSYFHDELSHKFLANRKTDVVGIVGYK 59
>SPAC22A12.13 |mug84||pig-P |Schizosaccharomyces pombe|chr
1|||Manual
Length = 120
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 354 SVLSYVVLKCFTFTMLVVSKFLRIRYFLFRW 262
S+L + V + T V KF I Y+L RW
Sbjct: 18 SMLGFGVYIVWALTPAPVLKFFEIHYYLSRW 48
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 271 QKISDPEELRDYQHRKRKAFEDNIRKNRL 357
+K SDPE R R+R+ FE+ +R+ L
Sbjct: 168 EKSSDPETERLNDLREREEFEERLRRKDL 196
>SPACUNK4.09 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 725 LARSSSLYLNSKFMYVCQACSSGCHSIQ 642
L +SSSL N+ F+++C + G H +
Sbjct: 262 LRQSSSLLRNNGFLFLCTFVNDGVHQYE 289
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.8 bits (54), Expect = 7.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 583 YTYMEEMLENVAGARQVFERWMEW 654
+ + +LEN +R++ E W EW
Sbjct: 556 FNQIANLLENKEKSRELLEAWQEW 579
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,653,563
Number of Sequences: 5004
Number of extensions: 81112
Number of successful extensions: 337
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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