Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B12
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 344 4e-95
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 50 3e-06
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 42 6e-04
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 42 8e-04
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 42 8e-04
U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical pr... 41 0.001
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 39 0.004
U10401-9|AAA19054.4| 771|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z92782-2|CAB07188.1| 331|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 30 1.9
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 30 1.9
AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical ... 30 2.4
AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm rece... 30 2.4
Z81068-1|CAB02982.1| 232|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81017-4|CAB02668.1| 181|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF016665-1|AAC71185.1| 143|Caenorhabditis elegans Hypothetical ... 29 4.3
Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical pr... 29 5.7
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 29 5.7
Z99278-6|CAD59170.1| 276|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone... 28 7.5
AF408758-1|AAO27837.1| 309|Caenorhabditis elegans nuclear recep... 28 7.5
AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear recep... 28 7.5
AF273772-1|AAG15121.1| 443|Caenorhabditis elegans nuclear recep... 28 7.5
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 28 9.9
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 28 9.9
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 28 9.9
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 28 9.9
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 28 9.9
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 344 bits (846), Expect = 4e-95
Identities = 143/220 (65%), Positives = 191/220 (86%), Gaps = 1/220 (0%)
Frame = +1
Query: 193 EIQITAEQLLREAKERDLEILPPPPKQKISDPEELRDYQHRKRKAFEDNIRKNRLVIGNW 372
++QITAEQLLREAKER+LE++PP PK KI+DP+EL++YQ +KRK FED IRKNR+ + NW
Sbjct: 30 QLQITAEQLLREAKERELELIPPAPKTKITDPDELKEYQRKKRKEFEDGIRKNRMQLANW 89
Query: 373 LKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTI 552
+KY +WEES +IQRARS++ERALDVDHR++++WL+Y EMEMR +Q+NHARN++DRA+TI
Sbjct: 90 IKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITI 149
Query: 553 LPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERARQI 732
+PR QFW KY+YMEE++EN+ GARQ+FERW+EW P EQAWQTYINFELRYKE++RAR +
Sbjct: 150 MPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPEQAWQTYINFELRYKEIDRARSV 209
Query: 733 YEQFVMVHP-DVKNWIKYAKFEXNHGFINGSRTVFXRAVE 849
Y++F+ VH +V+NWIKYAKFE +G+I +R + +A+E
Sbjct: 210 YQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAME 249
Score = 87.0 bits (206), Expect = 2e-17
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
W+ +A +E Q + AR I A+ ++ L+ Y ++E++ R+ + R L+++ +
Sbjct: 422 WIMFAHFEIRQLDLNAARKIMGVAIGKCPKD-KLFRAYIDLELQLREFDRCRKLYEKFLE 480
Query: 550 ILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHP---DEQAWQTYINFELRYKELER 720
P SQ W K+ +E +L + +R VF ++ E W+ YI+FE+ +E E+
Sbjct: 481 SSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQQPALDMPELLWKAYIDFEIACEEHEK 540
Query: 721 ARQIYEQFVMVHPDVKNWIKYAKFEXNHGFINGSRTVFXRAVESL 855
AR +YE + +K WI A+FE G G+R F RA +SL
Sbjct: 541 ARDLYETLLQRTNHIKVWISMAEFEQTIGNFEGARKAFERANQSL 585
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
WLKY+ EE + I AR I+ER ++ + W Y E+R ++++ AR+++ R +
Sbjct: 157 WLKYSYMEEVIENIPGARQIFERWIEWEPPEQA-WQTYINFELRYKEIDRARSVYQRFLH 215
Query: 550 ILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQT----YINFELRYKELE 717
+ Q W KY EE + AR +E+ ME+ +E +T + FE R KE E
Sbjct: 216 VHGINVQNWIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINETVLVAFALFEERQKEHE 275
Query: 718 RARQIYE 738
RAR I++
Sbjct: 276 RARGIFK 282
Score = 70.1 bits (164), Expect = 2e-12
Identities = 52/211 (24%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Frame = +1
Query: 268 KQKISDPEELRDYQHRKRKA-FEDNIRKNRLVIGNWLKYAQWEESQK-QIQRARSIYERA 441
++K + + D KRK +E + +N W Y + E+++ + +YERA
Sbjct: 304 EKKFGERVGIEDVIISKRKTQYEKMVEENGYNYDAWFDYLRLLENEETDREEVEDVYERA 363
Query: 442 LD--VDH-------RNVTLWLKYTEME-MRNRQVNHARNLWDRAVTILPR----VSQFWY 579
+ H R + LW+ Y E + + + AR ++ + I+P ++ W
Sbjct: 364 IANIPPHSEKRYWRRYIYLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWI 423
Query: 580 KYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERARQIYEQFVMVHP 759
+ + E ++ AR++ + P ++ ++ YI+ EL+ +E +R R++YE+F+ P
Sbjct: 424 MFAHFEIRQLDLNAARKIMGVAIGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFLESSP 483
Query: 760 D-VKNWIKYAKFEXNHGFINGSRTVFXRAVE 849
+ + WIK+A+ E G + SR VF AV+
Sbjct: 484 ESSQTWIKFAELETLLGDTDRSRAVFTIAVQ 514
Score = 46.0 bits (104), Expect = 3e-05
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Frame = +1
Query: 379 YAQWEESQKQIQRARSIYERALD--VDHRNVTLWLKYTEMEMRNRQ--------VNHARN 528
+A +EE QK+ +RAR I++ LD +R ++ YT+ E + + ++ +
Sbjct: 264 FALFEERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKKFGERVGIEDVIISKRKT 323
Query: 529 LWDRAVTILPRVSQFWYKYTYMEEMLE-NVAGARQVFERW---MEWHPDEQAWQTY---- 684
+++ V W+ Y + E E + V+ER + H +++ W+ Y
Sbjct: 324 QYEKMVEENGYNYDAWFDYLRLLENEETDREEVEDVYERAIANIPPHSEKRYWRRYIYLW 383
Query: 685 INF----ELRYKELERARQIYEQFVMVHPD-----VKNWIKYAKFEXNHGFINGSRTVFX 837
IN+ EL K+ +RARQ+Y+ + + P K WI +A FE +N +R +
Sbjct: 384 INYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAARKIMG 443
Query: 838 RAV 846
A+
Sbjct: 444 VAI 446
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Frame = +1
Query: 409 IQRARSIYERALDVDHRNVTLWLKYTEM-EMRNRQVNHARNLWDRAVTILPRVSQ--FWY 579
I + ++ YE+ ++ + N W Y + E ++++RA+ +P S+ +W
Sbjct: 318 ISKRKTQYEKMVEENGYNYDAWFDYLRLLENEETDREEVEDVYERAIANIPPHSEKRYWR 377
Query: 580 KYTYM-------EEML-ENVAGARQVFERWMEWHPDE-----QAWQTYINFELRYKELER 720
+Y Y+ EE++ ++ ARQV++ ++ P + + W + +FE+R +L
Sbjct: 378 RYIYLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNA 437
Query: 721 ARQIYEQFVMVHPDVKNWIKYAKFEXNHGFINGSRTVFXRAVES 852
AR+I + P K + Y E + R ++ + +ES
Sbjct: 438 ARKIMGVAIGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFLES 481
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 56.8 bits (131), Expect = 2e-08
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVD---------------HRNVTLWLKYTEMEMRN 504
W YA+ E K+ + A ++ +RA V HR+ LW Y + E
Sbjct: 442 WCAYAEMEMKHKRAKAALTVMQRACVVPKPGDYENMQSVQARVHRSPILWAMYADYEECC 501
Query: 505 RQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWM---EWHPDEQAW 675
V R ++D+ + + Q Y E E A Q +E+ + +W W
Sbjct: 502 GTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFELAFQAYEKGIALFKWPGVFDIW 561
Query: 676 QTY-INFELRY--KELERARQIYEQFVMVHPDVKN---WIKYAKFEXNHGFINGSRTVFX 837
TY + F RY K+LERAR ++EQ + P ++ YAK E HG + +++
Sbjct: 562 NTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLARHALSIYN 621
Query: 838 RA 843
RA
Sbjct: 622 RA 623
Score = 52.0 bits (119), Expect = 5e-07
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Frame = +1
Query: 328 FEDNIRKNRLVIGNWLKYAQWE-ESQKQIQRARSIYERALDVDHRNVTLW---LKYTEME 495
FE++I +N + W +Y + +++ ++ IYERAL V R+ LW LKY E
Sbjct: 29 FEEDIIRNPTSVNCWQRYIDHKLQNKSPAKQMFLIYERALAVFERSYKLWYHYLKYREST 88
Query: 496 MRNR--QVNHARNL---WDRAVTILPRVSQFWYKYTYMEEMLEN--VAGARQVFERWMEW 654
+ N+ N R L ++R + L ++ + W Y E M++ + R+VF+R +
Sbjct: 89 IVNKCPTDNSWRALCDTYERCLMRLHKMPRIW--ICYCEVMIKRGLITETRRVFDRALRS 146
Query: 655 HPDEQ---AWQTYINFELRYKELERARQIYEQFVMVHPDVK-NWIKY 783
P Q W YI F + E ++Y +++ ++P + ++++Y
Sbjct: 147 LPVTQHMRIWTLYIGFLTSHDLPETTIRVYRRYLKMNPKAREDYVEY 193
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +1
Query: 430 YERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILP--RVSQFWYKYTYMEEM 603
YER L H+ +W+ Y E+ ++ + R ++DRA+ LP + + W Y
Sbjct: 106 YERCLMRLHKMPRIWICYCEVMIKRGLITETRRVFDRALRSLPVTQHMRIWTLYIGFLTS 165
Query: 604 LENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERA 723
+ +V+ R+++ +P +A + Y+ + + +++ A
Sbjct: 166 HDLPETTIRVYRRYLKMNP--KAREDYVEYLIERDQIDEA 203
Score = 37.1 bits (82), Expect = 0.016
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 26/187 (13%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVT----LWLKYTEMEMRNRQVNHARNLWD 537
W+ A+ E + AR +E A+ V+ +W Y EMEM++++ A +
Sbjct: 404 WIGLAKLYEDNGDLDAARKTFETAVISQFGGVSELANVWCAYAEMEMKHKRAKAALTVMQ 463
Query: 538 RAVTI---------------LPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWH-PDEQ 669
RA + + R W Y EE V R+V+++ +E Q
Sbjct: 464 RACVVPKPGDYENMQSVQARVHRSPILWAMYADYEECCGTVESCRKVYDKMIELRVASPQ 523
Query: 670 AWQTYINFELRYKELERARQIYEQFVMVH--PDVKN-WIKY-AKFEXNHG--FINGSRTV 831
Y F + E A Q YE+ + + P V + W Y KF +G + +R +
Sbjct: 524 MIMNYAMFLEENEYFELAFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGKKLERARDL 583
Query: 832 FXRAVES 852
F + +E+
Sbjct: 584 FEQCLEN 590
Score = 36.3 bits (80), Expect = 0.028
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 14/176 (7%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
W YA +EE ++ R +Y++ +++ + + + Y N A +++ +
Sbjct: 491 WAMYADYEECCGTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFELAFQAYEKGIA 550
Query: 550 IL--PRVSQFWYKYTYMEEMLENVAG-----ARQVFERWMEWHPDEQA---WQTYINFEL 699
+ P V W TY+ + ++ G AR +FE+ +E P A + Y E
Sbjct: 551 LFKWPGVFDIW--NTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEE 608
Query: 700 RYKELERARQIYEQFV--MVHPDVKNW--IKYAKFEXNHGFINGSRTVFXRAVESL 855
+ A IY + + D+ + I K + +G I R +F RA+ L
Sbjct: 609 EHGLARHALSIYNRACSGVDRADMHSMYNIYIKKVQEMYG-IAQCRPIFERAISEL 663
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 373 LKYAQWEESQKQIQRARSIYERALDVDHRNV 465
L+YAQ E + +I RAR+IY A ++ V
Sbjct: 673 LRYAQLETTVGEIDRARAIYAHAAEISDPKV 703
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 673 WQTYINFELRYKELERARQIYEQFVMVHPDVKNWIK----YAKFE 795
W + ++ +R E ERAR +YE+ + V+++ + YA FE
Sbjct: 266 WCSLADYYIRSAEFERARDVYEEAIAKVSTVRDFAQVYDAYAAFE 310
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 49.6 bits (113), Expect = 3e-06
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Frame = +1
Query: 289 EELRDYQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVT 468
E++ D H R A+ IRK VI W+ + EE QI +AR E+A + +N
Sbjct: 747 EQMNDV-HGARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARVDLEKARLRNPKNDD 805
Query: 469 LWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWM 648
LWL+ E R A+ RA+ + W + +ME A + ++
Sbjct: 806 LWLESVRFEQRVGCPEMAKERMSRALQECEGSGKLWAEAIWMEGPHGRRAKSIDALKK-C 864
Query: 649 EWHPDEQAWQTYINFELRYKELERARQIYEQFVMVHPDVKN-WIKYAKFEXNHGFINGSR 825
E +P + + R ++++AR+ + + V + PD + + + FE HG +
Sbjct: 865 EHNPHVLIAAARLFWSER--KIKKAREWFVRAVNLDPDNGDAFANFLAFEQIHGKEEDRK 922
Query: 826 TVFXRAVES 852
+VF + V S
Sbjct: 923 SVFKKCVTS 931
Score = 48.8 bits (111), Expect = 5e-06
Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 2/162 (1%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
WL A+ E ++ R++Y AL R ++W E + ++ + +A
Sbjct: 569 WLADAENFEKEEAFTCVRTVYAIALKEFSRKRSIWDAAIHFEREHGSLDEHEAILLKACE 628
Query: 550 ILPRVSQFWYKYTYMEEMLENVAGARQVFERWME--WHPDEQAWQTYINFELRYKELERA 723
+P V +W + + + V AR E H E+ W E+ + + A
Sbjct: 629 TVPEVEDYWLMLAKLRFVNKRVGEARDTLMSAFEKHGHQSEKIWLAATKIEIETDQFDTA 688
Query: 724 RQIYEQFVMVHPDVKNWIKYAKFEXNHGFINGSRTVFXRAVE 849
R ++ + P + W+K A FE G + ++ + ++
Sbjct: 689 RGLFGKARAKAPSARVWMKNAHFEWCLGNVEEAKRLCEECIQ 730
Score = 35.1 bits (77), Expect = 0.065
Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 2/161 (1%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVT 549
W +E + +I +A + WL ++ N++V AR+ A
Sbjct: 603 WDAAIHFEREHGSLDEHEAILLKACETVPEVEDYWLMLAKLRFVNKRVGEARDTLMSAFE 662
Query: 550 ILPRVSQ-FWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERAR 726
S+ W T +E + AR +F + P + W +FE +E A+
Sbjct: 663 KHGHQSEKIWLAATKIEIETDQFDTARGLFGKARAKAPSARVWMKNAHFEWCLGNVEEAK 722
Query: 727 QIYEQFVMVHPDV-KNWIKYAKFEXNHGFINGSRTVFXRAV 846
++ E+ + + D K ++ + ++G+R + + +
Sbjct: 723 RLCEECIQKYDDFHKIYLVLGQVLEQMNDVHGARLAYTQGI 763
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 41.9 bits (94), Expect = 6e-04
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTL-WLKYTEMEMRNRQVNHARNLWDRAV 546
+ YA ++E KQ + ++IY+R L ++H N TL +++ R+ N+AR ++ RA
Sbjct: 331 YFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLTYVQLMRFVRRSEGPNNARLVFKRAR 390
Query: 547 TILPRVSQFWYKYTYME-EMLENVAGARQVFERWMEWHPDEQAW-QTYINFELRYKELER 720
Q + +E +++ A +VF+ ++ + +E + Y +F E
Sbjct: 391 EDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGLKKYENEPEFGLAYADFLSNLNEDNN 450
Query: 721 ARQIYEQFVM-----VHPDVKNWIKYAKFE 795
R ++E+ + ++ W ++ FE
Sbjct: 451 TRVVFERILTSSKLPADKSIRIWDRFLDFE 480
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/92 (20%), Positives = 40/92 (43%)
Frame = +1
Query: 433 ERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLEN 612
ER ++ + +V W E ++R ++ R+ ++ V P ++W Y E +N
Sbjct: 10 ERRIETNPFDVDAW-NLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKN 68
Query: 613 VAGARQVFERWMEWHPDEQAWQTYINFELRYK 708
++F R + + W+ YI++ K
Sbjct: 69 FENVEKLFSRCLVSVLNIDLWKCYIHYVFETK 100
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/87 (20%), Positives = 33/87 (37%)
Frame = +1
Query: 331 EDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQ 510
E I N + W + E + I + R YE + + W Y E E+R++
Sbjct: 10 ERRIETNPFDVDAWNLLLR-EHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKN 68
Query: 511 VNHARNLWDRAVTILPRVSQFWYKYTY 591
+ L+ R + + + W Y +
Sbjct: 69 FENVEKLFSRCLVSVLNI-DLWKCYIH 94
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 625 RQVFERWMEWHPDE-QAWQTYINFELRYKELERARQIYEQFVMVHPDVKNWIKYAKF 792
R +E ++ P+ + W+ YI ELR K E +++ + ++ ++ W Y +
Sbjct: 39 RDFYESLVKQFPNSGRYWKAYIEHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHY 95
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 41.5 bits (93), Expect = 8e-04
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTL-WLKYTEMEMRNRQVNHARNLWDRAV 546
+ YA ++E KQ + ++IY+R L ++H N TL +++ R+ N+AR ++ RA
Sbjct: 331 YFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLTYVQLMRFIRRSEGPNNARLVFKRAR 390
Query: 547 TILPRVSQFWYKYTYME-EMLENVAGARQVFERWMEWHPDEQAW-QTYINFELRYKELER 720
Q + +E +++ A +VF+ ++ + +E + Y +F E
Sbjct: 391 EDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGLKKYENEPEFGLAYADFLSNLNEDNN 450
Query: 721 ARQIYEQFVM-----VHPDVKNWIKYAKFE 795
R ++E+ + ++ W ++ FE
Sbjct: 451 TRVVFERILTSSKLPADKSIRIWDRFLDFE 480
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/92 (20%), Positives = 40/92 (43%)
Frame = +1
Query: 433 ERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLEN 612
ER ++ + +V W E ++R ++ R+ ++ V P ++W Y E +N
Sbjct: 10 ERRIETNPFDVDAW-NLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKN 68
Query: 613 VAGARQVFERWMEWHPDEQAWQTYINFELRYK 708
++F R + + W+ YI++ K
Sbjct: 69 FENVEKLFSRCLVSVLNIDLWKCYIHYVFETK 100
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/87 (20%), Positives = 33/87 (37%)
Frame = +1
Query: 331 EDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQ 510
E I N + W + E + I + R YE + + W Y E E+R++
Sbjct: 10 ERRIETNPFDVDAWNLLLR-EHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKN 68
Query: 511 VNHARNLWDRAVTILPRVSQFWYKYTY 591
+ L+ R + + + W Y +
Sbjct: 69 FENVEKLFSRCLVSVLNI-DLWKCYIH 94
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 625 RQVFERWMEWHPDE-QAWQTYINFELRYKELERARQIYEQFVMVHPDVKNWIKYAKF 792
R +E ++ P+ + W+ YI ELR K E +++ + ++ ++ W Y +
Sbjct: 39 RDFYESLVKQFPNSGRYWKAYIEHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHY 95
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 41.5 bits (93), Expect = 8e-04
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVDHRNVTL-WLKYTEMEMRNRQVNHARNLWDRAV 546
+ YA ++E KQ + ++IY+R L ++H N TL +++ R+ N+AR ++ RA
Sbjct: 326 YFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLTYVQLMRFIRRSEGPNNARLVFKRAR 385
Query: 547 TILPRVSQFWYKYTYME-EMLENVAGARQVFERWMEWHPDEQAW-QTYINFELRYKELER 720
Q + +E +++ A +VF+ ++ + +E + Y +F E
Sbjct: 386 EDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGLKKYENEPEFGLAYADFLSNLNEDNN 445
Query: 721 ARQIYEQFVM-----VHPDVKNWIKYAKFE 795
R ++E+ + ++ W ++ FE
Sbjct: 446 TRVVFERILTSSKLPADKSIRIWDRFLDFE 475
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/92 (20%), Positives = 40/92 (43%)
Frame = +1
Query: 433 ERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLEN 612
ER ++ + +V W E ++R ++ R+ ++ V P ++W Y E +N
Sbjct: 5 ERRIETNPFDVDAW-NLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKN 63
Query: 613 VAGARQVFERWMEWHPDEQAWQTYINFELRYK 708
++F R + + W+ YI++ K
Sbjct: 64 FENVEKLFSRCLVSVLNIDLWKCYIHYVFETK 95
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/87 (20%), Positives = 33/87 (37%)
Frame = +1
Query: 331 EDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQ 510
E I N + W + E + I + R YE + + W Y E E+R++
Sbjct: 5 ERRIETNPFDVDAWNLLLR-EHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKN 63
Query: 511 VNHARNLWDRAVTILPRVSQFWYKYTY 591
+ L+ R + + + W Y +
Sbjct: 64 FENVEKLFSRCLVSVLNI-DLWKCYIH 89
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 625 RQVFERWMEWHPDE-QAWQTYINFELRYKELERARQIYEQFVMVHPDVKNWIKYAKF 792
R +E ++ P+ + W+ YI ELR K E +++ + ++ ++ W Y +
Sbjct: 34 RDFYESLVKQFPNSGRYWKAYIEHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHY 90
>U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical
protein F25B4.5 protein.
Length = 710
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 364 GNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTE--MEMRNRQVNHARNLWD 537
G W KYA++E+ I A++++E+ + ++ LWL YT ++N R+L+
Sbjct: 134 GFWQKYAEYEKKMGNIAEAKAVWEKGIISIPLSIDLWLGYTADVKNIKNFPPESLRDLYA 193
Query: 538 RAVTI 552
RA+ I
Sbjct: 194 RAIEI 198
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Frame = +1
Query: 367 NWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAV 546
NW+ + + AR Y L W KY E E + + A+ +W++ +
Sbjct: 101 NWVNILAKVDQSDDVDFAREKYRSFLSRYPNCYGFWQKYAEYEKKMGNIAEAKAVWEKGI 160
Query: 547 TILPRVSQFWYKYTYMEEMLENV--AGARQVFERWME----WHPDEQAWQTYINFE 696
+P W YT + ++N R ++ R +E + ++ W I FE
Sbjct: 161 ISIPLSIDLWLGYTADVKNIKNFPPESLRDLYARAIEIAGLEYQSDRLWLEAIGFE 216
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 448 VDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGAR 627
+D + W+ ++ V+ AR + ++ P FW KY E+ + N+A A+
Sbjct: 94 IDVADFDNWVNILAKVDQSDDVDFAREKYRSFLSRYPNCYGFWQKYAEYEKKMGNIAEAK 153
Query: 628 QVFER 642
V+E+
Sbjct: 154 AVWEK 158
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +1
Query: 430 YERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKY 585
Y +D+ + W+ Y + E++ + L+DR + +FW KY
Sbjct: 373 YFHVKPLDYPQLFNWMSYLDFEIKEGHEERVKILFDRCLIPCSLYEEFWIKY 424
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 709 ELERARQIYEQFVMVHPDVKN-WIKYAKFEXNHGFINGSRTVFXRAVESL 855
+++ AR+ Y F+ +P+ W KYA++E G I ++ V+ + + S+
Sbjct: 114 DVDFAREKYRSFLSRYPNCYGFWQKYAEYEKKMGNIAEAKAVWEKGIISI 163
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 655 HPDEQAWQTYINFELRYKELERARQIYEQFVMVHPDVKN-WIKYAKF 792
+P W +Y++FE++ ER + ++++ ++ + WIKYA++
Sbjct: 381 YPQLFNWMSYLDFEIKEGHEERVKILFDRCLIPCSLYEEFWIKYARW 427
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 376 KYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTI- 552
K+AQ E +R R++ E + + LWL Y E +++ + HAR + +RA +
Sbjct: 1635 KFAQLEFKHGDAERGRTLLEGLVTAHPKKTDLWLVYAEAVLKHLGIEHARKVLERACNLG 1694
Query: 553 --LPRVSQFWYKYTYMEEMLENVAGARQV 633
+ ++ + K+ ME + A V
Sbjct: 1695 FSIHKMRPLYKKWLEMESKHGDAAAVELV 1723
Score = 33.9 bits (74), Expect = 0.15
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 7/161 (4%)
Frame = +1
Query: 391 EESQKQIQRARSIYERALDVDHRNVTLWLKYTEMEMRNRQVNHARNLWDRAV-TILPRVS 567
EE+ + I+++ + R + D + W++Y + + AR + A+ I P S
Sbjct: 1462 EENIELIEKSEEDHSRLVRSDPNSAINWIEYMSHFIEKSDLAAARKTAEEALGAINPTES 1521
Query: 568 ----QFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELERARQIY 735
+ W Y ME + A ++VFER + +T ++++ A QI
Sbjct: 1522 DELLKIWTAYLNMEVAYGDAATVQKVFERACKNANAYTVHKTLSKIYQKFEKNAEATQIL 1581
Query: 736 EQFVMVH--PDVKNWIKYAKFEXNHGFINGSRTVFXRAVES 852
EQ V ++ W A+ +R + RA++S
Sbjct: 1582 EQMVKKFRANQLEVWTLLAEHLMTQNDQKAARELLPRALKS 1622
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 370 WLKYAQWEESQKQIQRARSIYERALDVD---HRNVTLWLKYTEMEMRN 504
WL YA+ I+ AR + ERA ++ H+ L+ K+ EME ++
Sbjct: 1667 WLVYAEAVLKHLGIEHARKVLERACNLGFSIHKMRPLYKKWLEMESKH 1714
>U10401-9|AAA19054.4| 771|Caenorhabditis elegans Hypothetical
protein T20B12.1 protein.
Length = 771
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/152 (19%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
Frame = +1
Query: 409 IQRARSIYERALDV-DHRNVTLWLKYTEMEMRNRQVNHARNLWDRAVTILPRVSQFWYKY 585
I R + +A+++ D RN + + +++ A R++ + P W+
Sbjct: 432 ITRNLEYFTKAIELSDDRNARAHRSLGHLLLMDKKFEEAYKHLRRSLELQPIQLGTWFNA 491
Query: 586 TYMEEMLENVAGARQVFERWMEWHPDE-QAWQTYINFELRYKELERARQIYEQ---FVMV 753
Y LEN + Q + R + PD +AW +R+ + +A ++ ++ +
Sbjct: 492 GYCAWKLENFKESTQCYHRCVSLQPDHFEAWNNLSAAYIRHGQKPKAWKLLQEALKYNYE 551
Query: 754 HPDVKNWIKYAKFEXNHGFINGSRTVFXRAVE 849
HP+V W Y + G + + + R ++
Sbjct: 552 HPNV--WENYMLLSVDVGEFSQAIQAYHRLLD 581
>Z92782-2|CAB07188.1| 331|Caenorhabditis elegans Hypothetical
protein F14F8.3 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = -3
Query: 825 PRAIYETM-VXFKFXIFYP-ILYIWMHHNKLFIDLSSPFKF-FVPQFKVYVCLPSLLIWM 655
P A T+ + F F I +P I+++ +HH +F+ F F P F+ V
Sbjct: 92 PNAFTGTVNIIFVFCIVFPLIIFVHVHHLIIFLMAVQRFLLVFFPSFEPLV--------- 142
Query: 654 PFHPTFKYLSCSSYIFQ-HFLHVSIFVPKLRYSWQNCNSSVP*IPGMVYL 508
TF + + I+ HFL + + L W N S+ IP + YL
Sbjct: 143 ----TFGQKTTNKIIYTLHFLFILTHLGLLILDWANYQGSLSQIPTLYYL 188
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 316 KRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLK 480
KR+ F + N L NW++ Q + + + ++E+AL D +VT+W++
Sbjct: 58 KRRQFVEWAPLNPLNWKNWIEDFQNRKPEPSVAEVEEMFEKAL-FDENDVTIWVE 111
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +1
Query: 367 NWLKYAQWEESQKQIQRARSIYERALDVDHRNVTLWLKYTEM-EMRNRQVNHARNLWDRA 543
+W+ + E I+ A Y+RA+ +++ N + K EM + N + R A
Sbjct: 323 DWVHWGDEAEKFGMIEEAAVCYDRAIHLNNENWKFYEKRIEMLDRLNLRPLAMRTRLQAA 382
Query: 544 VTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINFELRYKELER 720
I + Q + + +++ R+V + ++ + +E+A Q+ F LR KE ER
Sbjct: 383 QLINNEILQ--VDFEWFHDLI------RKVAQYYITMNDEEKAIQSLEAFVLRSKEFER 433
>AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical
protein Y42A5A.2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 619 GARQVFERWMEWHPDEQAW 675
G R+ F RW+ WH DE W
Sbjct: 279 GQRRPFPRWILWHGDEFTW 297
>AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm
receptor protein 40 protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +1
Query: 712 LERARQIYEQFVMVHPDVKNWIK------YAKFEXNHGFING 819
L A+ +Y +VHPD+ W K + + +HG +NG
Sbjct: 107 LAAAQFVYRYLALVHPDLTKWFKGFGIMAWVCYPISHGVVNG 148
>Z81068-1|CAB02982.1| 232|Caenorhabditis elegans Hypothetical
protein F25H5.2 protein.
Length = 232
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 658 DAIPSNVQIPVLLQLHFPTFPPCKY 584
D + + V++ L+ H PTF PCKY
Sbjct: 24 DNVYTKVKMTYLVHKHQPTFAPCKY 48
>Z81017-4|CAB02668.1| 181|Caenorhabditis elegans Hypothetical
protein F58A3.3 protein.
Length = 181
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 211 EQLLREAKERDLEI----LPPPPKQKISDPEELRDYQHRKRKAFEDNIRKNRLVIG 366
E + E +E D E+ LPPPP Q++S +R +F++++R+ R + G
Sbjct: 39 EFIYHEEQEEDEELQELQLPPPPMQRVSRMGSIR---KAMTISFQNSLRRTRKIFG 91
>AF016665-1|AAC71185.1| 143|Caenorhabditis elegans Hypothetical
protein C49D10.7 protein.
Length = 143
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 162 FRHFCCLAVHVKFYVLHSL*IFSSV 88
F H L+V ++FY+LHS+ IF+ +
Sbjct: 119 FTHTWSLSVEIQFYLLHSIHIFNCI 143
>Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical
protein F54F7.4 protein.
Length = 336
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 241 DLEILPPPPKQKISDPEELRDYQHRKRKAFEDNIRKNR 354
D +PP I P+E + + +RK + +N+ KNR
Sbjct: 282 DFNWIPPNEPPPIEIPKEAYELFYERRKIYFENLHKNR 319
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 334 DNIRKNRLVIGNWL--KYAQWEESQKQIQRARSIYERALDVD 453
D + KNR WL + A+W SQK+ + A + ++A V+
Sbjct: 282 DFLLKNRFFFSRWLVPESARWLVSQKRYKEADEVLQKAASVN 323
>Z99278-6|CAD59170.1| 276|Caenorhabditis elegans Hypothetical
protein Y53C12B.5b protein.
Length = 276
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 684 VCLPSLLIWMPFHPTFKYLSCSSYIFQHFLHVSIF 580
VC PSLL + H F L +S IF +FL S+F
Sbjct: 151 VCFPSLLNFP--HNLFLSLVSNSMIFSYFLEFSLF 183
>Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical
protein M7.2 protein.
Length = 516
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 385 QWEESQKQIQRARSIYERALDVDHRNV 465
++EE++ ++A SIY RA +H+NV
Sbjct: 342 KYEETENYFKQALSIYNRAFPENHQNV 368
>U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 22 protein.
Length = 579
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 744 KLFIDLSSPFKFFVPQFKVYVCLPSLLIW 658
K + DL+ PF F+ YV L +L+IW
Sbjct: 464 KQYFDLAIPFARLEVSFEEYVLLKALIIW 492
>AF408758-1|AAO27837.1| 309|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 744 KLFIDLSSPFKFFVPQFKVYVCLPSLLIW 658
K + DL+ PF F+ YV L +L+IW
Sbjct: 194 KQYFDLAIPFARLEVSFEEYVLLKALIIW 222
>AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 555
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 744 KLFIDLSSPFKFFVPQFKVYVCLPSLLIW 658
K + DL+ PF F+ YV L +L+IW
Sbjct: 440 KQYFDLAIPFARLEVSFEEYVLLKALIIW 468
>AF273772-1|AAG15121.1| 443|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 443
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 744 KLFIDLSSPFKFFVPQFKVYVCLPSLLIW 658
K + DL+ PF F+ YV L +L+IW
Sbjct: 328 KQYFDLAIPFARLEVSFEEYVLLKALIIW 356
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 27.9 bits (59), Expect = 9.9
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 232 KERDLEILPPPPKQKISDP-EELRDYQHR-KRKAFEDNIRKNRLVIGNWLKYAQWEESQK 405
+E D+E PPPP Q P E+ R ++ E + L + + + + E+ +
Sbjct: 182 EEDDIEEPPPPPSQMPQLPIEQDRPTTSMITKEEIEIRSKIAALELELDVTHKKAEQYHE 241
Query: 406 QIQRARSIYERALDVDHRNVTLWLK---YTEMEMRNRQVNHARNLWDRAVTILPRVSQFW 576
+ +S ++ L+ + +K E E+ NR+ NH L D+ V V Q
Sbjct: 242 VLSSTKSHCDQ-LEKQNEQANYMIKNYQEREKELLNREENHVEQLRDKDVHYASLVRQLK 300
Query: 577 YKYTYMEEMLENVAGAR 627
+ +E LE R
Sbjct: 301 ERIDELESKLEEAEERR 317
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 27.9 bits (59), Expect = 9.9
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 232 KERDLEILPPPPKQKISDP-EELRDYQHR-KRKAFEDNIRKNRLVIGNWLKYAQWEESQK 405
+E D+E PPPP Q P E+ R ++ E + L + + + + E+ +
Sbjct: 216 EEDDIEEPPPPPSQMPQLPIEQDRPTTSMITKEEIEIRSKIAALELELDVTHKKAEQYHE 275
Query: 406 QIQRARSIYERALDVDHRNVTLWLK---YTEMEMRNRQVNHARNLWDRAVTILPRVSQFW 576
+ +S ++ L+ + +K E E+ NR+ NH L D+ V V Q
Sbjct: 276 VLSSTKSHCDQ-LEKQNEQANYMIKNYQEREKELLNREENHVEQLRDKDVHYASLVRQLK 334
Query: 577 YKYTYMEEMLENVAGAR 627
+ +E LE R
Sbjct: 335 ERIDELESKLEEAEERR 351
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 27.9 bits (59), Expect = 9.9
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 232 KERDLEILPPPPKQKISDP-EELRDYQHR-KRKAFEDNIRKNRLVIGNWLKYAQWEESQK 405
+E D+E PPPP Q P E+ R ++ E + L + + + + E+ +
Sbjct: 313 EEDDIEEPPPPPSQMPQLPIEQDRPTTSMITKEEIEIRSKIAALELELDVTHKKAEQYHE 372
Query: 406 QIQRARSIYERALDVDHRNVTLWLK---YTEMEMRNRQVNHARNLWDRAVTILPRVSQFW 576
+ +S ++ L+ + +K E E+ NR+ NH L D+ V V Q
Sbjct: 373 VLSSTKSHCDQ-LEKQNEQANYMIKNYQEREKELLNREENHVEQLRDKDVHYASLVRQLK 431
Query: 577 YKYTYMEEMLENVAGAR 627
+ +E LE R
Sbjct: 432 ERIDELESKLEEAEERR 448
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 27.9 bits (59), Expect = 9.9
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 232 KERDLEILPPPPKQKISDP-EELRDYQHR-KRKAFEDNIRKNRLVIGNWLKYAQWEESQK 405
+E D+E PPPP Q P E+ R ++ E + L + + + + E+ +
Sbjct: 376 EEDDIEEPPPPPSQMPQLPIEQDRPTTSMITKEEIEIRSKIAALELELDVTHKKAEQYHE 435
Query: 406 QIQRARSIYERALDVDHRNVTLWLK---YTEMEMRNRQVNHARNLWDRAVTILPRVSQFW 576
+ +S ++ L+ + +K E E+ NR+ NH L D+ V V Q
Sbjct: 436 VLSSTKSHCDQ-LEKQNEQANYMIKNYQEREKELLNREENHVEQLRDKDVHYASLVRQLK 494
Query: 577 YKYTYMEEMLENVAGAR 627
+ +E LE R
Sbjct: 495 ERIDELESKLEEAEERR 511
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 286 PEELRDYQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQIQRARSIYER 438
PE+ RDY HR+ +AF + L+ L SQ+ +++A+ I R
Sbjct: 206 PEQKRDYNHRRTEAFRRRRHEEELL----LSTPAGRISQEALEKAQQIMIR 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,166,216
Number of Sequences: 27780
Number of extensions: 452279
Number of successful extensions: 1740
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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