Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B12
(863 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 1.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.6
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 8.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 8.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 8.4
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 272 CLGGGGNISRSRSLASLSNCSAVIW 198
C GGGG +S SL+ S S++I+
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIF 33
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 272 CLGGGGNISRSRSLASLSNCSAVIW 198
C GGGG +S SL+ S S++I+
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIF 33
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 272 CLGGGGNISRSRSLASLSNCSAVIW 198
C GGGG +S SL+ S S++I+
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIF 33
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 272 CLGGGGNISRSRSLASLSNCSAVIW 198
C GGGG +S SL+ S S++I+
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIF 33
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 499 RNRQVNHARNLWDRAVTILPRVSQF 573
RN+Q + AR D AV + P++S F
Sbjct: 592 RNKQGHSARRSGDVAVIVPPKISPF 616
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 122 TFCTVYKYLVQFNLNLI*LHT 60
TFC V+ + + FN +LI + T
Sbjct: 210 TFCRVFPFHLMFNRDLIIVQT 230
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 122 TFCTVYKYLVQFNLNLI*LHT 60
TFC V+ + + FN +LI + T
Sbjct: 210 TFCRVFPFHLMFNRDLIIVQT 230
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 304 YQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQ 402
+ +R F+D + V +W K+ W+E+Q
Sbjct: 674 WSNRPNLLFKDEAKDLVSVNKSWNKWNDWQETQ 706
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 304 YQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQ 402
+ +R F+D + V +W K+ W+E+Q
Sbjct: 674 WSNRPNLLFKDEAKDLVSVNKSWNKWNDWQETQ 706
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 304 YQHRKRKAFEDNIRKNRLVIGNWLKYAQWEESQ 402
+ +R F+D + V +W K+ W+E+Q
Sbjct: 674 WSNRPNLLFKDEAKDLVSVNKSWNKWNDWQETQ 706
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 673 KLAHLDAIPSNVQIPVLLQLHFPTFPP 593
KL + + I + QIPV + +++ FPP
Sbjct: 114 KLYYKNYIINIEQIPVPVPVYYGNFPP 140
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 673 KLAHLDAIPSNVQIPVLLQLHFPTFPP 593
KL + + I + QIPV + +++ FPP
Sbjct: 339 KLYYKNYIINIEQIPVPVPVYYGNFPP 365
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/54 (20%), Positives = 23/54 (42%)
Frame = +1
Query: 532 WDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWHPDEQAWQTYINF 693
WD +S +EE N + F+R + ++P+ Q + ++N+
Sbjct: 268 WDLKYNTWEPISNLINCSDILEEFERNRLQLLESFKRKVNFYPNNQDIEKFLNY 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,568
Number of Sequences: 438
Number of extensions: 5594
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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