Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B10
         (849 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8DW04 Cluster: Putative ComB, accessory factor for Com...    36   1.7  
UniRef50_A0CXE9 Cluster: Chromosome undetermined scaffold_30, wh...    35   2.2  
UniRef50_Q4YUE6 Cluster: Putative uncharacterized protein; n=3; ...    35   3.0  
UniRef50_A3UAX4 Cluster: Possible CapK protein; n=1; Croceibacte...    34   3.9  
UniRef50_UPI00006CEBD5 Cluster: cyclic nucleotide-binding domain...    34   5.2  
UniRef50_Q6CRB1 Cluster: Similar to sp|Q02773 Saccharomyces cere...    34   5.2  
UniRef50_A0DC19 Cluster: Chromosome undetermined scaffold_45, wh...    33   6.9  
UniRef50_Q7R1D8 Cluster: GLP_306_28090_21908; n=2; Giardia lambl...    33   9.1  

>UniRef50_Q8DW04 Cluster: Putative ComB, accessory factor for ComA;
           n=1; Streptococcus mutans|Rep: Putative ComB, accessory
           factor for ComA - Streptococcus mutans
          Length = 300

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 27/100 (27%), Positives = 46/100 (46%)
 Frame = +1

Query: 337 VPAYIVQSLVKNNLDNNPAVVLNKCIVISKEQYIQLASENLFYVDRGVLWLSLKLSTNYK 516
           + +Y   S++KNNLDNN AV     ++    +Y + AS N     + +    +K     +
Sbjct: 62  IQSYSDSSIIKNNLDNNAAVEKGDVLI----EYSENASPNRQTEQKNI----IKERQKRE 113

Query: 517 NKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIEN 636
            K K+K Q + K+   K    + +  KK     ++ D EN
Sbjct: 114 EKEKKKHQKSKKKKKSKSKKASKDKKKKSKDKESSSDDEN 153


>UniRef50_A0CXE9 Cluster: Chromosome undetermined scaffold_30, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_30,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 737

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = +1

Query: 355 QSLVKNNLDNNPAVVLNKCIVISK--EQYIQLASENLFYVDRGVLWLSLKLSTNYKNKHK 528
           +S V ++L NNP +++ K + ISK  +  I+L  +N     +       K+  N  N   
Sbjct: 481 ESTVPSDLSNNPEIIMEKELQISKLEQSIIELNQKNNELKQK---LTQNKIEINDLNHEL 537

Query: 529 RKKQHNTKEHLHKFAFMTSEIHK 597
            +++   ++HL K AF  SE+++
Sbjct: 538 EQQKVTNQQHLDKRAFALSELNR 560


>UniRef50_Q4YUE6 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1657

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +1

Query: 400 LNKCIVISKEQYIQLASENLFYVDRGVLWLSL-KLSTNYKNKHKRKKQHNTKEHLHKFAF 576
           + K  +   + +    ++ +FY D+ VL  S+ +  +N KNK ++ K+ N  +H  K + 
Sbjct: 445 IKKIFIFDWDVHHNNGTQEIFYNDKNVLCFSIHRFDSNKKNKKRKSKEINKGKHTKKVSS 504

Query: 577 MTSEIHKKLWADRTADDIENI 639
           + ++ ++K      A+   NI
Sbjct: 505 IYNQKNEKKKKTIHANTTSNI 525


>UniRef50_A3UAX4 Cluster: Possible CapK protein; n=1; Croceibacter
           atlanticus HTCC2559|Rep: Possible CapK protein -
           Croceibacter atlanticus HTCC2559
          Length = 463

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +1

Query: 496 KLSTNYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWAD-RTADDIENIRIVPVVGSKLL 672
           KL+ +   +   + Q +  ++  + A   SE ++KL++D     D++NI+ +P++  +L 
Sbjct: 42  KLNRSLSREDLLRSQKSRYKNFIEQAIANSEFYRKLYSDIENPQDLDNIQRLPIIDKELF 101

Query: 673 KPDIGFVT 696
           + +I  +T
Sbjct: 102 RTNINDIT 109


>UniRef50_UPI00006CEBD5 Cluster: cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1283

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 592 VFQKS*KQIYVNVLWCCAVFYVCACFYNLCSILKKAKEHLCLRK 461
           + +K  +Q + ++L C  V YVC CF +  SIL   +  +C +K
Sbjct: 219 ITKKGAEQTFSDILCCTKVEYVCLCFEDYWSILSMYQLRMCEQK 262


>UniRef50_Q6CRB1 Cluster: Similar to sp|Q02773 Saccharomyces
           cerevisiae YML091c RPM2 ribonuclease P; n=1;
           Kluyveromyces lactis|Rep: Similar to sp|Q02773
           Saccharomyces cerevisiae YML091c RPM2 ribonuclease P -
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 1220

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 24/93 (25%), Positives = 45/93 (48%)
 Frame = +1

Query: 310 IMDHFTIKSVPAYIVQSLVKNNLDNNPAVVLNKCIVISKEQYIQLASENLFYVDRGVLWL 489
           I  H  + +VP  +V + V  N +N    + ++   +S+ +  +L   NLFY   G ++ 
Sbjct: 47  IPQHNILTAVPHPVVVANV--NYNNVERALQSRDAELSRLESEEL---NLFYEKDGEIFY 101

Query: 490 SLKLSTNYKNKHKRKKQHNTKEHLHKFAFMTSE 588
           S +   NY  K      HN K+  + F ++++E
Sbjct: 102 SGEHDVNYSKKSSYGANHNKKKRSNSFTYLSNE 134


>UniRef50_A0DC19 Cluster: Chromosome undetermined scaffold_45, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_45,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 828

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
 Frame = +1

Query: 349 IVQSLVKNNLDNNPAVVLNKCIVISKEQYIQLASENLFYVDRGVLWLSLKLSTNYKNKHK 528
           IVQS +K  ++  P ++   CI+ S   + Q+  +NLF+ +  +  L LKL +N  + H+
Sbjct: 389 IVQSTIKP-IEILPYLL--SCIIASSSYFHQIY-DNLFFGEL-IKQLILKLRSNPAS-HE 442

Query: 529 RKKQHNTKEHLHKFAFMT----SEIHKKLWADRTADDIENIRIVPVVGSKLLKPDIGFVT 696
            K       H + F  ++     E  K L   +TAD++EN+ I+     K ++ D   + 
Sbjct: 443 VKNIALILCHWYLFESISLQFIKEFIKYLLKSQTADNVENLLIIIQYCGKKIRQDNPAIL 502

Query: 697 ENELHNMSSCFGLNDFNDIEITFHPVPSLLCSPKIAITAE-VSLLLN 834
           +  + ++   F     +  +     +  L  + KIA  +E +  +LN
Sbjct: 503 KLIIEDIKQAFSTASESRTKFLLMTLDDLRLNKKIASQSERLEFILN 549


>UniRef50_Q7R1D8 Cluster: GLP_306_28090_21908; n=2; Giardia lamblia
           ATCC 50803|Rep: GLP_306_28090_21908 - Giardia lamblia
           ATCC 50803
          Length = 2060

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 544 NTKEHLHKFAFMTSEIHKKLWADRTADDIENIRIVPVVGSKLLKP----DIGFVTEN 702
           N KE  H F F+ +E HK +   RT    E +R+ P++ S    P    D GF+  N
Sbjct: 321 NRKESQHSFDFLRTEYHKLIDQHRTISIYELVRLSPILQSIFTFPHNAKDGGFIGLN 377


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,362,592
Number of Sequences: 1657284
Number of extensions: 13799623
Number of successful extensions: 32652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32632
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)