Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B10
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0509 + 3792255-3792661,3792745-3792851,3792949-3793043,379...    32   0.50 
11_04_0374 + 16923063-16923176,16923214-16923363,16923547-16924101     30   2.7  
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767...    29   3.5  
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171...    29   3.5  
03_02_0816 + 11487811-11488708,11488835-11489235                       29   6.2  

>07_01_0509 +
           3792255-3792661,3792745-3792851,3792949-3793043,
           3793169-3793245,3793334-3793454,3793533-3793592,
           3793672-3793812
          Length = 335

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 613 RTADDIENIRIVPVVGSKLLKPDIGFVTENELHNMSSCFGLN 738
           RT  D+EN+R        L K D  F+ EN ++ + S FG N
Sbjct: 292 RTDPDLENLRKTEEFNVLLNKYDESFINENAINAIKSLFGFN 333


>11_04_0374 + 16923063-16923176,16923214-16923363,16923547-16924101
          Length = 272

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 671 SNLDPTTGTILMFSISSAVLSAHNFLCISEVIKANLCKCS 552
           SN +PT  T+L F++S  +      LC SE   A   KCS
Sbjct: 64  SNKEPTITTVLHFTVSDVLYLVTTELCSSEQKVAIPTKCS 103


>03_03_0008 -
           13674602-13674708,13675272-13675439,13676169-13676787,
           13676868-13677330,13677855-13678036,13678093-13678235,
           13678315-13678423,13679000-13679456,13680490-13682473,
           13682507-13682626,13682920-13682971
          Length = 1467

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
 Frame = +1

Query: 580 TSEIHKKLWADRTADDIENIRIVPVVGSKLLKPDIGFV-TENELHNMSSCFGLNDFNDIE 756
           +  +H+ L A  +A+  E   +  V GSK L P+ GFV +EN   N S+   +   N   
Sbjct: 455 SKRLHRALEA-MSANVAETNNLPEVTGSKQLIPN-GFVASENSHSNKSADAVVTATNGSA 512

Query: 757 ITFHPVPSL----LCSPKIAITAEVSLLLND 837
           I   P PSL    + SPK    +  S+L N+
Sbjct: 513 IAESPRPSLCTESMHSPKCKTHSSESILQNN 543


>02_05_1059 + 33815979-33816235,33816467-33816732,33817149-33817192,
            33817363-33817539,33817638-33817964,33818067-33818192,
            33818518-33818622,33818815-33820125,33820221-33820382,
            33820416-33820517,33820549-33821272,33821358-33821451,
            33821824-33821986
          Length = 1285

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +1

Query: 400  LNKCIVISKEQYIQLASENLFYVDRGVLWLSLKLSTNYKNKHKRKKQHN 546
            LNK +    ++ ++  +  +F+  + +L  S+KL  + K KHKR K+H+
Sbjct: 1029 LNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKL--HKKRKHKRSKKHH 1075


>03_02_0816 + 11487811-11488708,11488835-11489235
          Length = 432

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 649 PVVGSKLLKPDIGFVTENELHNMSSCFGLNDFNDIEITFHPVPSLLCSPK 798
           P VGSK++KP    V   +   +  C   N+ + + +  HPV ++   P+
Sbjct: 283 PAVGSKIVKPSRTLVFSGDYCKIKPC---NELHAVAMYHHPVVAIEAIPR 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,346,833
Number of Sequences: 37544
Number of extensions: 325916
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)