Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B10
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 29 3.2
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 3.2
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 29 4.2
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 29 4.2
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 29 4.2
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 29 4.2
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas... 29 5.5
AC024821-2|AAP86610.1| 588|Caenorhabditis elegans Hypothetical ... 28 7.3
Z83123-9|CAB05605.1| 321|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z83123-3|CAB05604.1| 321|Caenorhabditis elegans Hypothetical pr... 28 9.6
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 490 SLKLSTNYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENIRIVPVVG 660
S+ S K +H+ K+H K +LHKF S IH + + + ++ +P++G
Sbjct: 20 SIFASEKEKLEHRASKRHVKKWNLHKFFRDESTIHGTMAVSEMLERYK-LKKIPIIG 75
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 490 SLKLSTNYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENIRIVPVVG 660
S+ S K +H+ K+H K +LHKF S IH + + + ++ +P++G
Sbjct: 20 SIFASEKEKLEHRASKRHVKKWNLHKFFRDESTIHGTMAVSEMLERYK-LKKIPIIG 75
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 508 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 639
N KN +R+K +KE + + ++I +K D+TA D I
Sbjct: 379 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 422
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 508 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 639
N KN +R+K +KE + + ++I +K D+TA D I
Sbjct: 446 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 489
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 508 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 639
N KN +R+K +KE + + ++I +K D+TA D I
Sbjct: 446 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 489
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 508 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 639
N KN +R+K +KE + + ++I +K D+TA D I
Sbjct: 446 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 489
>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
protein 11 protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 478 VLWLSLKLSTNYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKL--WADRTADDIENIRIVP 651
+LW + ++ Y KH K K ++ A + EI+ + + D D E I +
Sbjct: 642 LLWFAPEIIRRYAVKHDLSKLELAKADIYSLAIVLYEIYGRQGPFGDDLLDSDEIIEQLK 701
Query: 652 VV-GSKLLKPDIGFVTE 699
G L +PDI +T+
Sbjct: 702 FPDGGALTRPDIHLITK 718
>AC024821-2|AAP86610.1| 588|Caenorhabditis elegans Hypothetical
protein Y55B1AR.2b protein.
Length = 588
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 740 SFNPKHEDMLCNSFSVTKPMSGLSN-LDPTTGTILMFSISSAVLSAHN 600
+FN KH L +T P +G +N + TT T L + +VL HN
Sbjct: 355 TFNVKHSSTLARLQKLTPPNNGNTNPILSTTTTPLSSRTTRSVLRVHN 402
>Z83123-9|CAB05605.1| 321|Caenorhabditis elegans Hypothetical
protein T04A11.1 protein.
Length = 321
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 340 PAYIVQSLVKNNLDNNPAVVLNKCIVISKEQYIQLASE 453
P+YIV + K NPA V ++Y+++A+E
Sbjct: 6 PSYIVDAFAKKRFSGNPAAVCLIPQAKKDDEYLKIAAE 43
>Z83123-3|CAB05604.1| 321|Caenorhabditis elegans Hypothetical
protein T04A11.4 protein.
Length = 321
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 340 PAYIVQSLVKNNLDNNPAVVLNKCIVISKEQYIQLASE 453
P+YIV + K NPA V ++Y+++A+E
Sbjct: 6 PSYIVDAFAKKRFSGNPAAVCLIPQAKKDDEYLKIAAE 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,803,962
Number of Sequences: 27780
Number of extensions: 357071
Number of successful extensions: 871
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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