Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B08
         (824 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    25   0.55 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.0  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 527 VSANISSVSLSKSGCTSAT*SLQAMTLPRALSRSSTRCN 411
           V  N     + +  CTS    L+  TLP ALS   T+CN
Sbjct: 41  VLTNYIKCLMDEGPCTSEGRELKK-TLPDALSSGCTKCN 78


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 518 NISSVSLSKSGCTSAT*SLQAMTLPRALSRSSTRCN 411
           N  +  L K  CT     L++ T+P ALS    +CN
Sbjct: 40  NYVNCLLDKGRCTPEGKKLKS-TIPEALSTDCAKCN 74


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 648 FILVLYICLRVYQPSSVAQRSVRTNKYVSRY 556
           F  V +I    +       RS R +KY +RY
Sbjct: 8   FFGVFFIIFSDFVNGKTLHRSTRDDKYTTRY 38


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 559 LLFV*ILQRLMCRLIFLLCL 500
           LLF+  +    C LI LLC+
Sbjct: 279 LLFLLCIYYFYCALIILLCI 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,473
Number of Sequences: 336
Number of extensions: 4362
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)