Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B04
(804 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1 pro... 188 1e-49
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 27 0.68
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 27 0.68
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 26 1.2
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 26 1.2
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 26 1.2
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 26 1.2
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 4.8
AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal ... 23 8.3
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 23 8.3
>AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1
protein protein.
Length = 160
Score = 188 bits (459), Expect = 1e-49
Identities = 88/148 (59%), Positives = 108/148 (72%)
Frame = +1
Query: 79 SDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXX 258
+DL ++E+A F FS+YD+EG G++DA +LG+ LRALN NPT+ I
Sbjct: 3 NDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKK 62
Query: 259 XXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 438
FLPI+SQ KK+K+QG +EDFLECLKLYDKNE+G ML AELTH+L ALGE+LDD E
Sbjct: 63 IKFEEFLPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVE 122
Query: 439 VAEVTKDCMDPEDDDGMIPYAAFLKKVM 522
+ V KDCMDPEDDDG IPYA FLKK+M
Sbjct: 123 LDNVMKDCMDPEDDDGNIPYAPFLKKMM 150
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 27.1 bits (57), Expect = 0.68
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 703 HVDIPYNILXTDKPLFYTNNII 768
++DI +NI K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 27.1 bits (57), Expect = 0.68
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 703 HVDIPYNILXTDKPLFYTNNII 768
++DI +NI K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 697 PSHVDIPYNILXTDKPLFYTNNII 768
P+ DI + I+ K LFYT N+I
Sbjct: 217 PTETDITFYIIIRRKTLFYTVNLI 240
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 703 HVDIPYNILXTDKPLFYTNNII 768
++DI +NI K LFYT N+I
Sbjct: 226 YLDITFNITMRRKTLFYTVNLI 247
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 685 PARAPSHVDIPYNILXTDKPLFYTNNII 768
P A + DI +NI K LFYT N+I
Sbjct: 233 PCCAEPYPDIFFNITLRRKTLFYTVNLI 260
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 415 GEKLDDSEVAEVTKDCMDPEDDDG 486
G K+++ +AEV K +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 24.2 bits (50), Expect = 4.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 709 DIPYNILXTDKPLFYTNNII 768
DI +NI K LFYT N+I
Sbjct: 228 DIIFNITLRRKTLFYTVNLI 247
>AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal
carrier protein AP-1 protein.
Length = 171
Score = 23.4 bits (48), Expect = 8.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 385 AELTHTLLALGEKLDDSEVAEVTKDCMDP 471
AE ++ DD +VT++C+DP
Sbjct: 64 AESFKCVIVKNSTKDDVNKVQVTRECLDP 92
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 23.4 bits (48), Expect = 8.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 432 VVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 325
V+K L+ CK +V +L +H + Q + ++IF
Sbjct: 130 VLKALSYCKPKVTQLQGRHVRTDEEMEQCEIAEDIF 165
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,697
Number of Sequences: 2352
Number of extensions: 13482
Number of successful extensions: 43
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -