Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B02
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.83 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.83 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.8  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 423 GNMAAFDMDDPKSIVSPGGVGFDINCGVR 509
           GN  AFD  DPK +        +++CG R
Sbjct: 55  GNGLAFDASDPKFLTENCDYIHNVDCGDR 83


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 423 GNMAAFDMDDPKSIVSPGGVGFDINCGVR 509
           GN  AFD  DPK +        +++CG R
Sbjct: 55  GNGLAFDASDPKFLTENCDYIHNVDCGDR 83


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 269 NVGGA*ELL*TWYVRWIPS 325
           N G   + + TW+VRW+ S
Sbjct: 9   NAGAPPQEMPTWFVRWLNS 27


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2

Query: 323 KEST*HTRSTTIPKLLQH*FLKCTVNVKHSFNIH 222
           +EST +T+S+++ + L +   +   N   +FN H
Sbjct: 336 RESTTNTQSSSLSEFLTNTHKRKIENTSTTFNAH 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,632
Number of Sequences: 336
Number of extensions: 4507
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)