Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_B02
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    27   0.59 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   1.4  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   3.2  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    24   4.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.6  

>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = +3

Query: 126 KIMVVRQYNEELKYLEKINSYCWRIKKGFQPNMNVEGV 239
           K  + ++Y+E+L+  + +++    +K+GF+  MN + +
Sbjct: 171 KTFLEKRYSEDLELDDAVHTAILTLKEGFEGQMNADNI 208


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 300 PGMSGGFLPGVKQIANVAALPGIVGR 377
           PG  G  +PG K  A +A  PG+ G+
Sbjct: 497 PGQPGYGIPGQKGNAGMAGFPGLKGQ 522



 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 300 PGMSGGFLPGVKQIANVAALPGIVGR 377
           PG  G  +PG   +  V   PG+ GR
Sbjct: 156 PGYPG--IPGTNGVPGVPGAPGLAGR 179


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 150  NEELKYLEKINSYCWRIKKGFQPNMNVEG 236
            N E  YL+ IN  C    K FQP  N+ G
Sbjct: 1102 NPEEPYLDGINYNCVAPGKRFQPMSNLSG 1130


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 243 YVNSTLEKLMLEELRNCCRPGMSGGFLPGVKQIANVAAL 359
           YV+ST+EK +  +    C   ++G   PG    A+ A L
Sbjct: 560 YVSSTMEKTLDSQQAGSCGESLNGTVGPGGDNDASQANL 598


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 493 ISNPTPPGDTIDLGSSISKAAIFPI 419
           +S+  PPG+ +D+      AA +P+
Sbjct: 18  VSSLVPPGECLDISKVTLDAAFYPL 42


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 312 GGFLPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAI 422
           G  L  + +  N   +PGI+GR   L  + + Y  AI
Sbjct: 585 GKVLDALMRQKNEGRIPGILGRLGNLGGIDARYDVAI 621


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,041
Number of Sequences: 2352
Number of extensions: 17329
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)