Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_B01
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical pr... 294 5e-80
AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical ... 91 1e-18
EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 3.6
EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 3.6
AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical ... 29 3.6
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 6.4
>Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical
protein C36B1.3 protein.
Length = 282
Score = 294 bits (721), Expect = 5e-80
Identities = 136/234 (58%), Positives = 176/234 (75%), Gaps = 8/234 (3%)
Frame = +1
Query: 91 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 270
MPYANQP++ +TEL+++ +KFV+ DT+LSVANS+RRVF+AE PT+AIDWVQ+E N++VL
Sbjct: 1 MPYANQPNIEVTELTNDIIKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLH 60
Query: 271 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL 450
DEF+AHR+GLIP ISD V+K++Y+RDC C +FC ECS+ F L +KC DE T VTT L
Sbjct: 61 DEFIAHRMGLIPFISDYHVEKMQYTRDCECAEFCDECSIPFILQMKCKDEATLAVTTEHL 120
Query: 451 ---KSSDPRVVPVTS---RHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHA 612
+ D V P R R + ++ +EILI+KLRKGQEL L+AY KKGFGKEHA
Sbjct: 121 MPMHNLDTTVRPACGKALRERGSTRDEFHNREEILIVKLRKGQELNLKAYVKKGFGKEHA 180
Query: 613 KWNPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNED--QYEADFNWEAKP 768
KWNPT GV+FEYDPDN +RHT+YP +EWP+S+H+ L ED + EA F + KP
Sbjct: 181 KWNPTCGVAFEYDPDNALRHTIYPNVEEWPRSDHSSLPEDSTEKEAPFEPDNKP 234
>AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical
protein H43I07.2 protein.
Length = 366
Score = 90.6 bits (215), Expect = 1e-18
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Frame = +1
Query: 97 YANQPSVHITELSDENV--KFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 270
Y +Q V + SD+ + +F + E +AN++RRV IAE PTMA++ + L N++V+
Sbjct: 50 YCDQIQVAMVNESDDGMTLEFDITRIEAPIANALRRVLIAEVPTMALEKIYLYQNTSVIQ 109
Query: 271 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVE----------FTLDVKCTDE 420
DE L HR+GL+PL D + + + +C E F ++V CT
Sbjct: 110 DEVLCHRLGLLPLRVDPRGFQFPKEKVVGINEKGVDCDEEPEGDPAKNLIFKINVSCTKN 169
Query: 421 QTRHVTTADLK---------SSDPRVVPVTSRHRD--EDQADYGEADEILIIKLRKGQEL 567
+ T D K S VP+ + E+ +D+IL+ KLR GQE+
Sbjct: 170 RNAVPTATDPKQLYHNSSVYSRAFEWVPIADQKTQFTEEAHPRMVSDDILVAKLRPGQEI 229
Query: 568 KLRAYAKKGFGKEHAKWNPTAGVSFEYDP 654
+ +A KG G++HAK++P A S+ P
Sbjct: 230 EASCHAVKGIGRDHAKFSPVATASYRLLP 258
>EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c
protein.
Length = 765
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 628 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 744
+GVS YD D + H Y D PK L + +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272
>EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b
protein.
Length = 818
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 628 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 744
+GVS YD D + H Y D PK L + +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325
>AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical
protein Y55D9A.1c protein.
Length = 765
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 628 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 744
+GVS YD D + H Y D PK L + +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272
>AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical
protein Y55D9A.1b protein.
Length = 818
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 628 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 744
+GVS YD D + H Y D PK L + +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325
>AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical
protein Y55D9A.1a protein.
Length = 816
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 628 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 744
+GVS YD D + H Y D PK L + +E+
Sbjct: 285 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 323
>AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical
protein Y38C1AA.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 325 VDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTR 429
+D +Y+ D +C CSEC C D TR
Sbjct: 79 IDNFKYNPDALCAGTCSECKTHTDKLRICVDCLTR 113
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 514 YGEADEILIIKLRKGQELKLRAYAKKGFGKE--HAKWNPTAGVSFEYDPDNIMRHTLYPK 687
YGE IL R+ ++ + ++ E + W+P + +PD+I++ L+
Sbjct: 3 YGELVHILDYYFRQLRDYSRQVQLERQADTEGRRSSWSPKHWFGVKGNPDDILKLPLH-F 61
Query: 688 PDEWP-KSEHTELNEDQYEADFNW 756
D+ P S H LN + ++ N+
Sbjct: 62 DDQLPTSSHHPPLNSSSHHSNHNY 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,335,525
Number of Sequences: 27780
Number of extensions: 386553
Number of successful extensions: 1057
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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