Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_A24
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB...   178   8e-45
AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p pro...   176   2e-44
AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA...   176   2e-44
AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p pro...    31   1.3  

>AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB,
           isoform B protein.
          Length = 330

 Score =  178 bits (433), Expect = 8e-45
 Identities = 90/188 (47%), Positives = 120/188 (63%)
 Frame = +2

Query: 140 NIIFPEAHQKSNMDSLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKL 319
           +I+    H  +   +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    
Sbjct: 32  SIVLSFGHIMTENMTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PC 90

Query: 320 PLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGF 499
           P+L++LSGLTC+ +NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGF
Sbjct: 91  PVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGF 150

Query: 500 YLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNP 679
           Y+DA  EPW+ +Y+M SY+  EL D ++ A   VV P +            AL   L+NP
Sbjct: 151 YVDAKEEPWSKHYKMYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNP 208

Query: 680 GQYKSVSA 703
           G Y+SVSA
Sbjct: 209 GLYQSVSA 216



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 703 FAPICNPSACPWGVKAFXGYLG 768
           FAPI NP+ CPWG KAF GYLG
Sbjct: 217 FAPIANPTECPWGKKAFAGYLG 238


>AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p
           protein.
          Length = 286

 Score =  176 bits (429), Expect = 2e-44
 Identities = 88/174 (50%), Positives = 115/174 (66%)
 Frame = +2

Query: 182 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 361
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 362 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 541
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 542 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGQYKSVSA 703
           M SY+  EL D ++ A   VV P +            AL   L+NPG Y+SVSA
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSA 172



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 703 FAPICNPSACPWGVKAFXGYLG 768
           FAPI NP+ CPWG KAF GYLG
Sbjct: 173 FAPIANPTECPWGKKAFAGYLG 194


>AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA,
           isoform A protein.
          Length = 286

 Score =  176 bits (429), Expect = 2e-44
 Identities = 88/174 (50%), Positives = 115/174 (66%)
 Frame = +2

Query: 182 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 361
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 362 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 541
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 542 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGQYKSVSA 703
           M SY+  EL D ++ A   VV P +            AL   L+NPG Y+SVSA
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSA 172



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 703 FAPICNPSACPWGVKAFXGYLG 768
           FAPI NP+ CPWG KAF GYLG
Sbjct: 173 FAPIANPTECPWGKKAFAGYLG 194


>AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p
           protein.
          Length = 560

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -2

Query: 353 YKLDQTNNIEVVIS-HHPLLPEGGDR*KNSFCILVQMMHENTLFDNHQKFYWTILI 189
           Y+  QT  + V +   HPLL  GGD  ++ +      + + + F+  +KF + IL+
Sbjct: 427 YQQQQTTQLPVQLQLQHPLLQTGGDGKQSVYAPPTVQLRKQSRFNARKKFQFAILV 482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,163,298
Number of Sequences: 53049
Number of extensions: 770328
Number of successful extensions: 1804
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)