Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_A14
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 24 1.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 4.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.7
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 278 YEYSYLVYDENTGDHKTQHELSDGSVVRGGYSLIQPDGYIREVKYVADD----LTGFNAV 445
+E S + + +G K Q + V +G S PDG + YVAD+ + G +
Sbjct: 46 FETSNGISHQESGQPK-QVDNETPVVSQGSDSYTAPDGQQVSITYVADENGFQVQGSHIP 104
Query: 446 VKKFLPVNVEKKIEHHEKSHPD 511
+P +++ +E + +HP+
Sbjct: 105 TAPPIPPEIQRALEWN-AAHPE 125
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 262 FICDNYWNTGLICYYICSGRGY 197
FIC+N GL +Y RG+
Sbjct: 119 FICENETRQGLTLHYRSKRRGF 140
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 256 CDNYWNT 236
C+NYWNT
Sbjct: 101 CNNYWNT 107
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 204 GAIDCPGYIQGVPHGATRFGTT 139
G +D P Q P AT GTT
Sbjct: 288 GEVDLPPETQPTPPSATLVGTT 309
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 473 EKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHE 610
+ +I+ EK DP H N+ ++ HS + V +H E
Sbjct: 674 DSRIKTTEKLSTDPNTHFQVNQSHGIKRSGSHSWEGDSFKVSKHEE 719
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.7
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 461 PVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHETK 616
P +V K E S P E+KN K TEH I +ETK
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETK 205
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,652
Number of Sequences: 438
Number of extensions: 3122
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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