Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_A02
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...   157   9e-41
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    68   9e-14
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    54   2e-09
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   4.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.4  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   5.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   5.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   5.8  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score =  157 bits (382), Expect = 9e-41
 Identities = 74/131 (56%), Positives = 95/131 (72%)
 Frame = +3

Query: 93  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 272
           +F+GK+YK+ SSENFD+FMK +GVG++TRK  ++V+P VEL ++   Y L T+S FK TE
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62

Query: 273 MKFKPGEEFEEDRADGAKVKSVCTFEGNXLKQVXKAPDGLEVTYVREFGPEEMKAVMTAK 452
           +KFK GEEFEE+  DG KVKSVCT +GN L QV K     + T  REF   EMKA+M   
Sbjct: 63  IKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVD 120

Query: 453 DVTCTRVYKVQ 485
           D+ CTRVYK+Q
Sbjct: 121 DIICTRVYKIQ 131


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 68.1 bits (159), Expect = 9e-14
 Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
 Frame = +3

Query: 90  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 269
           ++F GK ++  S  NF+EF K +G   +         P+ EL K+GDE+   +SS   T 
Sbjct: 2   VQFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTY 59

Query: 270 EMKFKPGEEFEE--DRADGAKVKSVCTFEGNXLKQVXKAPDGLEVTYVREFGPEEMKA-V 440
              FK    FEE        K ++V + EGN  K   +  D L+VT + EF   E+   +
Sbjct: 60  TKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHI 119

Query: 441 MTAK-DVTCTRVYK 479
            T K DV  TRVYK
Sbjct: 120 STNKSDVKATRVYK 133


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 53.6 bits (123), Expect = 2e-09
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
 Frame = +3

Query: 93  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 272
           +F GK ++  S  NF+EF K +G   +         P+ EL K+GDE+   +SS   T  
Sbjct: 1   QFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYT 58

Query: 273 MKFKPGEEFEE--DRADGAKVKSVCTFEGNXLKQVXKAPDGLEVT 401
             FK    FEE        K ++V + EGN  K   +  D L+VT
Sbjct: 59  KTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 277 FISVVLKVEEVTKLYSSPSLRSSTV 203
           FIS+++  +E+  + +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 466 PESTRSSKDSIPRSGVGAADSRTSR 540
           P  ++ +K   PR G GAA  R SR
Sbjct: 429 PPRSKKNKLKKPRQGDGAAVKRKSR 453


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 339 CTFEGNXLKQVXKAPDGL 392
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 339 CTFEGNXLKQVXKAPDGL 392
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 339 CTFEGNXLKQVXKAPDGL 392
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,420
Number of Sequences: 438
Number of extensions: 3637
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)