Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P14
(870 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 101 3e-23
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 88 3e-19
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 31 0.060
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.14
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 25 2.3
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 4.0
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 24 5.2
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 24 5.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 9.2
AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding pr... 23 9.2
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 101 bits (242), Expect = 3e-23
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Frame = -2
Query: 845 DLGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQ 666
DLGV D L++++HID++V R LG + R +F + K +Y VRS+LEY
Sbjct: 846 DLGVLLDSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCV 905
Query: 665 VWNPRYKIYINRLETIQTKF----MRFLQFKTKVYDPDYETRCRRHHILPLEERRRIADI 498
VW+P I R+E IQ K +R L ++ + P Y RCR + PL RRR A
Sbjct: 906 VWSPTTASSIARIEAIQRKLTRYALRLLPWQDRNNLPPYAARCRLLGLEPLSVRRRNAQC 965
Query: 497 VLYSKIAQSEVDSSYLLSLLCLRVPPRSIMRESRQSSRLGVPRGGTNYRRNAFFIRAANS 318
+ + +DSS LL + + P R++ SR++ RL PR R + F R +
Sbjct: 966 SFIAGLLNGSIDSSPLLHRVDIYAPSRTL--RSRETLRLAQPRSSAG-RSDPMF-RMSAV 1021
Query: 317 FNALADFPELDIFNTSTKSIRRTL 246
FN ++D + DI K R L
Sbjct: 1022 FNTVSDCFDFDISTQCFKERLRLL 1045
Score = 24.2 bits (50), Expect = 5.2
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 628 NLFI*ILYRGFHTCEQYSRILRTYAQYSTLKILALVNCAPSRLIKPN 768
N I + FH C + + +S+ + A V C P + KPN
Sbjct: 358 NDMISMFNNSFH-CSNFISLDEAVCSFSSFMLQAFVVCVPVQRPKPN 403
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 88.2 bits (209), Expect = 3e-19
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Frame = -2
Query: 845 DLGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQ 666
DLG+ D +L+++ +D ++ +A +LGFI R + F + LY A VR +LEY S
Sbjct: 775 DLGIILDSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRNLYYALVRPLLEYASI 834
Query: 665 VWNPRYKIYINRLETIQTKFMR--FLQFKTKVYDPDYETRCRRHHILPLEERRRIADIVL 492
+WNP +R+E+IQ F R F + P YETR + ++ L RR+++
Sbjct: 835 IWNPPTIDGCSRIESIQRLFTRVAFRRLFGAASLPPYETRLQLFNLHSLSFRRQVSQACF 894
Query: 491 YSKIAQSEVDSSYLLSLLCLRVPPRSIMRESRQSSRLGVPRGGTNYRRNAFFIRAANSFN 312
+ S+ D+ LLS + L VP RS+ R L + T Y N + FN
Sbjct: 895 IGGLLLSDTDAPDLLSSISLYVPSRSL----RPRDPLSIETRHTLYTFNDPILSCFRLFN 950
Query: 311 ALADFPELDIFNTSTKSIRRTLVS 240
F L F++S S R + S
Sbjct: 951 ---HFYYLFDFDSSLNSFRNRIFS 971
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.7 bits (66), Expect = 0.060
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFK-VLYCAYVRSILEYCSQ 666
LGV D +LS++ H++ +A + + L + K K L + V SIL Y +
Sbjct: 754 LGVVIDNQLSWKSHVEYCTTKALRTAKALGCLMRNHSGPKCAKRRLLASVVDSILRYAAP 813
Query: 665 VWNPRYK 645
VW+ K
Sbjct: 814 VWHEATK 820
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.5 bits (63), Expect = 0.14
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFKVLYCAYV-RSILEYCSQ 666
LGVT KLS+ H+ + RA RL + + K A V S++ Y +
Sbjct: 733 LGVTLQDKLSWLPHVKEVTERAGKIADATSRLLRNHSEPRASKAKLLASVSESVMRYAAP 792
Query: 665 VWN 657
VW+
Sbjct: 793 VWS 795
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 25.4 bits (53), Expect = 2.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHID---NIVXRAYISL-GFIKRLGAQFTSAKIFKVLYCAYVRSILEY 675
LGV D +LS+ KH++ N V +A ISL + +G +S ++ L S L Y
Sbjct: 708 LGVIIDDRLSFRKHVEYACNNVFKAAISLIQIMPNIGGPKSS---WRRLLADVAFSRLRY 764
Query: 674 CSQVW 660
+ +W
Sbjct: 765 NAAIW 769
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 428 PLNITTIEDKTSPPQTELFCYKEQYQLSYVFPPVEVC 538
PLNI + + P + FCY ++ ++ V + +C
Sbjct: 2346 PLNIAELVKEPKPLKAIDFCYHDEDEMVTVLDCITLC 2382
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 24.2 bits (50), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 531 KYVMPSTSRLVVGIIHFSFKLKKP 602
K V+PS +R +VGI+ ++ KP
Sbjct: 155 KKVLPSANRAMVGIVAGGGRIDKP 178
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 24.2 bits (50), Expect = 5.2
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFKVLYCA-YVRSILEYCSQ 666
LG+ D +L Y +HI + RA + + R+ + + + A + + + Y S
Sbjct: 717 LGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRSGPRSSRRRIIANTIIAGIRYASS 776
Query: 665 VW 660
+W
Sbjct: 777 IW 778
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 9.2
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 428 PLNITT-IEDKTSPPQTELFCYKEQYQLSYVFP 523
P +IT ++ + CY EQ+ LSYVFP
Sbjct: 3070 PFHITNCFRTNSADNLNTITCY-EQHGLSYVFP 3101
>AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding
protein AgamOBP40 protein.
Length = 282
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 605 MRFLQFKTKVYDPDYETRC 549
+R Q+K VY PD +T C
Sbjct: 54 LRLDQYKKFVYPPDRDTMC 72
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,262
Number of Sequences: 2352
Number of extensions: 14438
Number of successful extensions: 52
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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