Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P14
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113570-1|AAI13571.1|  275|Homo sapiens chromosome 16 open read...    30   9.5  

>BC113570-1|AAI13571.1|  275|Homo sapiens chromosome 16 open reading
           frame 72 protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -2

Query: 584 TKVYDPDYETRCRRHHI-LPLEERRRIADIVLYSKIAQSEVDSSYLLSLLCLRVPPRSIM 408
           T +Y    +T  R   I + +  +RR  D++ + K  +  +    L+S LC +VPP    
Sbjct: 98  TNLYKESVDTHQRSFDIGIQIGYQRRNKDVLAWVKKRRRTIRREDLISFLCGKVPP---P 154

Query: 407 RESRQSSRLGV 375
           R SR   RL V
Sbjct: 155 RNSRAPPRLTV 165


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,757,202
Number of Sequences: 237096
Number of extensions: 1951627
Number of successful extensions: 3686
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3686
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)