Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P14
(870 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 36 0.055
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 36 0.055
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 36 0.073
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 36 0.073
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 36 0.096
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 33 0.68
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 31 1.6
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 31 1.6
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 8.3
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 36.3 bits (80), Expect = 0.055
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKI-FKV-LYCAYVRSILEYCS 669
LG+T DRKL++ +HI NI + + L A + KV +Y + + L Y
Sbjct: 753 LGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL 812
Query: 668 QVWNPRYKIYINRLETIQTKFMR 600
QV+ K ++N++ +Q K +R
Sbjct: 813 QVYGIAAKSHLNKIRILQAKTLR 835
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 36.3 bits (80), Expect = 0.055
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKI-FKV-LYCAYVRSILEYCS 669
LG+T DRKL++ +HI NI + + L A + KV +Y + + L Y
Sbjct: 555 LGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL 614
Query: 668 QVWNPRYKIYINRLETIQTKFMR 600
QV+ K ++N++ +Q K +R
Sbjct: 615 QVYGIAAKSHLNKIRILQAKTLR 637
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 35.9 bits (79), Expect = 0.073
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISL----GFIKRLGAQFTSAKIFKVLYCAYVRSILEY 675
LG+ D+KL+++ HI+N + + + I R S KI +++ IL Y
Sbjct: 773 LGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKI--IIFKTIFNPILMY 830
Query: 674 CSQVWNPRYKIYINRLETIQTKFMRFL 594
S VW + +I +L+ Q K ++ +
Sbjct: 831 GSPVWGRCAQTHIKKLQICQNKLLKLI 857
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 35.9 bits (79), Expect = 0.073
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISL----GFIKRLGAQFTSAKIFKVLYCAYVRSILEY 675
LG+ D+KL+++ HI+N + + + I R S KI +++ IL Y
Sbjct: 721 LGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKI--IIFKTIFNPILMY 778
Query: 674 CSQVWNPRYKIYINRLETIQTKFMRFL 594
S VW + +I +L+ Q K ++ +
Sbjct: 779 GSPVWGRCAQTHIKKLQICQNKLLKLI 805
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 35.5 bits (78), Expect = 0.096
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIK-RLGAQFT-SAKIFKVLYCAYVRSILEYCS 669
LG+T D++L++ H+ R Y + ++ L + T + + + +Y V I Y
Sbjct: 754 LGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGI 813
Query: 668 QVWNPRYKIYINRLETIQTKFMR 600
Q+W K NR++ +Q + MR
Sbjct: 814 QIWGIAAKSNYNRIQVLQNRAMR 836
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 32.7 bits (71), Expect = 0.68
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNI--VXRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCS 669
LGV DR+L++ KH+ +I RA ++ + S +Y + +Y
Sbjct: 748 LGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGC 807
Query: 668 QVWNPRYKIYINRLETIQTKFMRFL 594
Q+W +I R++ IQ K R +
Sbjct: 808 QIWGLACDSHIKRIQAIQNKVARLI 832
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRL-GAQFTSAKIFK-VLYCAYVRSILEYCS 669
LGV DR+L++ KHI+ + + L A+ + FK +LY + ++ I Y S
Sbjct: 739 LGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGS 798
Query: 668 QVWNPRYKIYINRLETIQTKFMRFL 594
++W + I+ ++ Q++ +R +
Sbjct: 799 ELWGNASRSNIDIIQRAQSRILRII 823
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRL-GAQFTSAKIFK-VLYCAYVRSILEYCS 669
LGV DR+L++ KHI+ + + L A+ + FK +LY + ++ I Y S
Sbjct: 739 LGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGS 798
Query: 668 QVWNPRYKIYINRLETIQTKFMRFL 594
++W + I+ ++ Q++ +R +
Sbjct: 799 ELWGNASRSNIDIIQRAQSRILRII 823
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 29.1 bits (62), Expect = 8.3
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = -2
Query: 842 LGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKI-FKVL-YCAYVRSILEYCS 669
LGV DR+L++ +HI+ + + + L + + KVL Y + ++ I Y S
Sbjct: 741 LGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGS 800
Query: 668 QVWNPRYKIYINRLETIQTKFMR 600
Q+W I+ ++ Q+K +R
Sbjct: 801 QLWGNASNSNIDIIQRAQSKILR 823
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,323,469
Number of Sequences: 53049
Number of extensions: 613711
Number of successful extensions: 1349
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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