Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P14
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    44   1e-04
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    43   2e-04
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    42   8e-04
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    32   0.46 
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    32   0.46 
U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical pr...    28   10.0 
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    28   10.0 
AL032618-2|CAA21485.1|  640|Caenorhabditis elegans Hypothetical ...    28   10.0 
AC024741-1|AAK68394.3|  789|Caenorhabditis elegans Hypothetical ...    28   10.0 

>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
 Frame = -2

Query: 845 DLGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQ 666
           DLG     KL + +H    +  A   L  I    +  ++ K+  +LY  ++R  LEY + 
Sbjct: 149 DLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYST-SNKKLMILLYKTFIRPRLEYGTV 207

Query: 665 VWNPRYKIYINRLETIQTKFMRFLQFKTK-----VYDPDYETRCRRHHILPLE---ERRR 510
           V +P  K     +E++Q  F R L  + K       D DY+T   R+ +  L+    RR+
Sbjct: 208 VSSPTKKSDEKAIESVQNAFTRRLYSRIKKRYINPTDKDYKTSMERNELFNLQTLSTRRK 267

Query: 509 IADIVLYSKIAQSEVD 462
           I D +   ++   +VD
Sbjct: 268 IIDRIQVIRMNTGKVD 283


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
 Frame = -2

Query: 845 DLGVTHDRKLSYEKHIDNIVXRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQ 666
           DLG     KL +  H    +  A   L  +    +  ++ K+  +LY  ++R  LEY + 
Sbjct: 179 DLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYST-SNKKLMILLYKTFIRPRLEYGTV 237

Query: 665 VWNPRYKIYINRLETIQTKFMRFLQFK-TKVY----DPDYETRCRRHHILPLE---ERRR 510
           V +P  K     +E++Q  F R L  +  K Y    D DY+T   R+ +  L+    RR+
Sbjct: 238 VSSPTKKSDEKTIESVQNAFTRRLYSRINKRYFNPTDKDYKTAMERNELFDLQTLSTRRK 297

Query: 509 IADIVLYSKIAQSEVD 462
           I D +   ++   +VD
Sbjct: 298 IIDRIQVIRMNNGKVD 313


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = -2

Query: 845  DLGVTHDRKLSYEKHIDNIVXRAYI-SLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCS 669
            DLG+  D KL +E HI  +   A + S   +K   +   S K +  LY  YV  I+ YCS
Sbjct: 978  DLGLITDCKLKFEHHIVKVSCLAMLRSKQILKAFSS--NSPKFYAHLYKTYVAPIMNYCS 1035

Query: 668  QVWNPRYKIYIN-RLETIQTKFMRFLQFKTKVYDPDYETR 552
            +V+ P     ++ +LE     F + +  +       YE R
Sbjct: 1036 EVYAPHSNSVLSAKLEQPLRHFTKRVLQRCNTKFSSYENR 1075


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/86 (24%), Positives = 44/86 (51%)
 Frame = -2

Query: 692 RSILEYCSQVWNPRYKIYINRLETIQTKFMRFLQFKTKVYDPDYETRCRRHHILPLEERR 513
           R I E  S+ + P++ ++  RLE +   F+     +  V   D++TRCR      L++++
Sbjct: 4   RRIHEILSRKF-PKW-VFEERLEPLDWSFLPVEIRREVVKHTDFQTRCRLRQ-CSLQDQQ 60

Query: 512 RIADIVLYSKIAQSEVDSSYLLSLLC 435
            +  +++     + E D +Y+  L+C
Sbjct: 61  IVDSLLIELPFVRIETDKNYVSVLIC 86


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/86 (24%), Positives = 44/86 (51%)
 Frame = -2

Query: 692 RSILEYCSQVWNPRYKIYINRLETIQTKFMRFLQFKTKVYDPDYETRCRRHHILPLEERR 513
           R I E  S+ + P++ ++  RLE +   F+     +  V   D++TRCR      L++++
Sbjct: 4   RRIHEILSRKF-PKW-VFEERLEPLDWSFLPVEIRREVVKHTDFQTRCRLRQ-CSLQDQQ 60

Query: 512 RIADIVLYSKIAQSEVDSSYLLSLLC 435
            +  +++     + E D +Y+  L+C
Sbjct: 61  IVDSLLIELPFVRIETDKNYVSVLIC 86


>U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical
           protein C16C8.16 protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 770 IYRLFXLYCLYASHKTVSYH 829
           +YRLF +Y L   H+T++Y+
Sbjct: 564 LYRLFFVYTLLEDHQTIAYY 583


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
            protein Y46G5A.4 protein.
          Length = 2145

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 638  YKFYIADSIPVNNTLGYCAHMHSTA 712
            YK ++ D +PV + L +C H H  A
Sbjct: 1713 YKKFLCDPLPVESHLDHCLHDHFNA 1737


>AL032618-2|CAA21485.1|  640|Caenorhabditis elegans Hypothetical
           protein Y42A5A.2 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 707 YCAYVRSI--LEYCSQVWNPRYKIYINRLETIQTKF-MRFLQFKTKVYDP 567
           Y  +VR I  LE+ S  W    K   +RLE  QT+F MR +Q +  +  P
Sbjct: 412 YLLHVRIIHLLEHSSGAWPHTSKFEFDRLEQNQTEFLMRVVQHEFPILFP 461


>AC024741-1|AAK68394.3|  789|Caenorhabditis elegans Hypothetical
           protein R05G9R.1 protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 501 ISYPTSFLQWKYVMPSTSRLVVGIIHFSFKLKKP 602
           I+YPT++L    V P +SRL    I  +  L++P
Sbjct: 399 ITYPTTYLSTSSVRPPSSRLTFSPIRRTTTLEEP 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,268,039
Number of Sequences: 27780
Number of extensions: 325284
Number of successful extensions: 812
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)