Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P13
(840 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 291 1e-79
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 149 4e-37
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 141 1e-34
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 135 8e-33
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 111 9e-26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 108 8e-25
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 93 4e-20
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 46 5e-06
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 30 0.47
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 28 1.9
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 27 4.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 7.6
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 291 bits (713), Expect = 1e-79
Identities = 133/225 (59%), Positives = 174/225 (77%)
Frame = -2
Query: 797 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 618
M+R YD+RTTIFSPEGRLYQVEYA+EAI+HAG +LGI+A DGI+LAAE++ T+KLL++
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 617 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 438
+EK+Y + D+M+C+VAG+T+DAN+L N R + Q+YL + E +PCEQLV +CD+KQ
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG 120
Query: 437 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 258
YTQYGG RPFGVS LY GWD GYQL+QS+PSGNYG W+A IG NS + S ++QEYK
Sbjct: 121 YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK 180
Query: 257 ENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTRKDNKTSI 123
+ + L EA A+A+K LSKTLD LT EK+E AT+T+ K +
Sbjct: 181 D-DINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKM 224
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 149 bits (362), Expect = 4e-37
Identities = 90/226 (39%), Positives = 130/226 (57%), Gaps = 1/226 (0%)
Frame = -2
Query: 797 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 618
M +Y T FSP G+L Q+EYA+ A++ TS+GI ATDG++LA E++ T++L
Sbjct: 1 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGAS 60
Query: 617 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQ-RYLLQYGESIPCEQLVSWLCDVKQ 441
EK+ + D+ +G+ D VL ++ R +AQ Y Y E P + LV + V Q
Sbjct: 61 L-EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQ 119
Query: 440 AYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 261
TQ GG RPFGVS+L G D+ G LYQ DPSG Y WKAT IG +S AA + L++ Y
Sbjct: 120 ESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRY 178
Query: 260 KENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTRKDNKTSI 123
+ E L +A AI L +T + +LT + +E+A ++ K + I
Sbjct: 179 ND-ELELDDAVHTAILALKETFE-GELTEDNIEIAVVSTKPTDSGI 222
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 141 bits (341), Expect = 1e-34
Identities = 80/219 (36%), Positives = 128/219 (58%), Gaps = 6/219 (2%)
Frame = -2
Query: 785 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 606
YD FSPEGRL+QVEYA+EAI T++G+ D ++L E+R T+ L+ E EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLM-ESHSVEK 66
Query: 605 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ- 429
+++++ + C+++G+T+DA + R+ Q + Y E E +CD+ + +
Sbjct: 67 LFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEG 126
Query: 428 YGGK-----RPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQE 264
G+ RPFGV++L G D+H G QLY S+PSG Y ++A IG+ S A S L +E
Sbjct: 127 EDGEERIMSRPFGVALLIAGIDEH-GPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKE 185
Query: 263 YKENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLT 147
+ + TL EA+ L +KVL + ++ KL + V++A +T
Sbjct: 186 F-HKDMTLEEAEVLILKVLRQVME-EKLDSKNVQLAKVT 222
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 135 bits (326), Expect = 8e-33
Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 1/213 (0%)
Frame = -2
Query: 785 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 606
YD ++FSP+GRL QVEY EA+ T++ + + I++ ER+N KL + F +K
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNF-QK 62
Query: 605 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQY 426
I +++ + + AG+ +DA +L ++ R+ AQ + L + + E L ++ V+Q YTQ
Sbjct: 63 IAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQS 122
Query: 425 GGKRPFGVSILYMGWDKHYGY-QLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENE 249
GG RPFGVS L G+D ++YQ++P+G Y WKAT IG S AA L++ +KE
Sbjct: 123 GGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEG- 181
Query: 248 TTLAEAQALAIKVLSKTLDMTKLTPEKVEMATL 150
L+ + + + V S L++ + +E+A +
Sbjct: 182 --LSRDETIHLAV-SSLLEVVQTASGNIELAIM 211
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 111 bits (268), Expect = 9e-26
Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 3/203 (1%)
Frame = -2
Query: 794 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVF 618
AR +D T+FSPEGRLYQVEYA +A ++AG TS+G+ + + ++++ +KL+D
Sbjct: 4 ARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDAST 63
Query: 617 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 438
++ + + C + G +DA + R A + + G +PC+ L + ++ Q
Sbjct: 64 VKH-VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQV 122
Query: 437 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 258
TQ RP GV++ + D G L++ DP+G Y G+KAT G ++ L++ +K
Sbjct: 123 STQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFK 182
Query: 257 EN--ETTLAEAQALAIKVLSKTL 195
++ + L + I+ L +L
Sbjct: 183 KDGIPSNLTDTVETGIQALMSSL 205
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 108 bits (260), Expect = 8e-25
Identities = 67/222 (30%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Frame = -2
Query: 788 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 609
+YD T +SP+GRL+QVEYA+EAI ++G+++ +L A +RN +L + +
Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSS---YQK 61
Query: 608 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 429
K+ +++D + ++AG+ DA VL+N ++ A + IP +L+S + + Q TQ
Sbjct: 62 KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQ 121
Query: 428 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENE 249
G+RP+GV L +G+D+ G L + PSG + T +G+ S +A + +++
Sbjct: 122 EYGRRPYGVGFLVIGYDES-GPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFP 180
Query: 248 TTLAEAQAL-AIKVLSKTLDM-TKLTPEKVEMATLTRKDNKT 129
+ E L A++ L TL +LT E V ++ + + + T
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYT 222
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 93.1 bits (221), Expect = 4e-20
Identities = 60/202 (29%), Positives = 96/202 (47%)
Frame = -2
Query: 764 FSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDD 585
FSP+GRL+Q EYA +A+ +A T +GI DG++LA E+ T+KLL + + +I ++
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLL-KPRVNNRIGSVDRH 72
Query: 584 MVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFG 405
+ + G D + R A + YG IP + L + Q +T Y RPFG
Sbjct: 73 IGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFG 132
Query: 404 VSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQA 225
V +D G LY +P+G Y G+ G A + L ++ + + +A
Sbjct: 133 VMSFVATYDSE-GPHLYMVEPNGVYWGYNGAAAGKGRQVARNEL-EKLNFSSLKMKDAVK 190
Query: 224 LAIKVLSKTLDMTKLTPEKVEM 159
A ++L T D ++EM
Sbjct: 191 EAARILYATHDEENNKEHEIEM 212
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 46.4 bits (105), Expect = 5e-06
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Frame = -2
Query: 716 ISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSDANVLT 537
+ + GT++ I +LA + R+ N F +++++ DD+V +G +DA L
Sbjct: 10 VQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALAL- 68
Query: 536 NELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKR--PFGVSILYMGWDKHYGY 363
++ I QR L + S C V+ T GKR P+ V G DK
Sbjct: 69 --VKRIQQRIDLYHDNHERKMSAQSCACMVR---TLLYGKRFFPYYVYTTVAGIDKEGKG 123
Query: 362 QLYQSDPSGNYGGWKATCIGNNSAA 288
++Y DP G+Y + C SAA
Sbjct: 124 EIYSFDPVGSYE--REWCRAGGSAA 146
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 293 HYCYRCMLLSTPHSFHWDQTGRADNHSAYPSPYT 394
HYC +C + P S+H R N + P+T
Sbjct: 400 HYCLKCFQVKPPRSYHCGACKRCINRYDHHCPWT 433
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 27.9 bits (59), Expect = 1.9
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = -2
Query: 383 WDKHYGYQLYQSDPSG--NYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKV 210
+DK YG Q D N G K +N+ + L +E K E EA+ +A KV
Sbjct: 46 YDKLYGEQDLSKDLENTLNVSGTK----DSNAEEQPAKLTKEEKRVERE--EAKRMASKV 99
Query: 209 LSKTLDMTK-LTPEKVEMATLTRKDNKTSIRMLAN 108
L KT++ TK V+ + K + +MLAN
Sbjct: 100 LIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLAN 134
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 686 LATDGILLAAERRNTNKLLDEVFFSE 609
L + GIL +R+NT L+ V++SE
Sbjct: 6 LLSKGILSIIKRKNTGNLIPHVYYSE 31
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 529 NSFVKTLASDVIPATEQTMSSLSL*IFSEKNTSSRSLLVFLRSA-AKRIPSVAKIPSDVP 705
NSF TL +D +P SL +F + T SR L F+R + PS + +P
Sbjct: 382 NSFDFTLENDQVPPRLIASECTSLEVFIQHITLSRILSHFVRKVYPVKSPSDSHCKVSLP 441
Query: 706 A 708
A
Sbjct: 442 A 442
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,302,534
Number of Sequences: 5004
Number of extensions: 69793
Number of successful extensions: 195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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