Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P12
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   235   4e-62
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   233   9e-62

>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  235 bits (574), Expect = 4e-62
 Identities = 119/253 (47%), Positives = 160/253 (63%)
 Frame = -3

Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
           YNTPKYR +   +NKD+T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG 
Sbjct: 45  YNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGL 101

Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
                                   ++Y VEP D     FR  LDVGL RTTTG RVFGA+
Sbjct: 102 LLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERR-PFRALLDVGLIRTTTGNRVFGAL 160

Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
           KGA+DGGL++PHS KRF G+  + K+ ++++HR +I+G HVA+YMRS+ +++ + F+  F
Sbjct: 161 KGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHF 220

Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
           S+Y+K G+ AD +EA+YKK H AIRADP              KR+N +KLT  +RK    
Sbjct: 221 SEYLKKGIDADGMEALYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLTYEQRKASLV 279

Query: 59  AKEGCLXQETAGA 21
            +   L   +AGA
Sbjct: 280 ERLNAL-NSSAGA 291


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  233 bits (571), Expect = 9e-62
 Identities = 118/253 (46%), Positives = 160/253 (63%)
 Frame = -3

Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
           YNTPKYR +   +NKD+T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG 
Sbjct: 45  YNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGL 101

Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
                                   ++Y VEP D     FR  LDVGL RTTTG RVFGA+
Sbjct: 102 LLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERR-PFRALLDVGLIRTTTGNRVFGAL 160

Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
           KGA+DGGL++PHS KRF G+  + K+ ++++HR +I+G HVA+YMRS+ +++ + F+  F
Sbjct: 161 KGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHF 220

Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
           S+Y+K G+ AD +E++YKK H AIRADP              KR+N +KLT  +RK    
Sbjct: 221 SEYLKKGIDADGMESLYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLTYEQRKASLV 279

Query: 59  AKEGCLXQETAGA 21
            +   L   +AGA
Sbjct: 280 ERLNAL-NSSAGA 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,000,255
Number of Sequences: 37544
Number of extensions: 362311
Number of successful extensions: 841
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)