Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P12
(784 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 304 2e-82
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 303 3e-82
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 303 3e-82
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 303 3e-82
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 303 3e-82
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 301 1e-81
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 299 5e-81
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 3e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 164 3e-40
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 105 1e-22
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 36 0.12
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 304 bits (746), Expect = 2e-82
Identities = 143/243 (58%), Positives = 178/243 (73%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGL 103
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 164 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQF 223
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + KRWN K++LA++K++
Sbjct: 224 SQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVA 281
Query: 59 AKE 51
K+
Sbjct: 282 QKK 284
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 303 bits (745), Expect = 3e-82
Identities = 143/243 (58%), Positives = 178/243 (73%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGL 103
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 164 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQF 223
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + KRWN K++LA++K++
Sbjct: 224 SQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVA 281
Query: 59 AKE 51
K+
Sbjct: 282 QKK 284
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 303 bits (745), Expect = 3e-82
Identities = 143/243 (58%), Positives = 178/243 (73%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGL 103
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 164 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQF 223
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + KRWN K++LA++K++
Sbjct: 224 SQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVA 281
Query: 59 AKE 51
K+
Sbjct: 282 QKK 284
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 303 bits (745), Expect = 3e-82
Identities = 143/243 (58%), Positives = 178/243 (73%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGL 103
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 164 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQF 223
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + KRWN K++LA++K++
Sbjct: 224 SQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVA 281
Query: 59 AKE 51
K+
Sbjct: 282 QKK 284
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 303 bits (745), Expect = 3e-82
Identities = 142/243 (58%), Positives = 178/243 (73%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGL 103
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 164 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQF 223
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + +RWN K++LA++K++
Sbjct: 224 SQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKERWNRPKMSLAQKKDRVA 281
Query: 59 AKE 51
K+
Sbjct: 282 QKK 284
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 301 bits (740), Expect = 1e-81
Identities = 142/243 (58%), Positives = 177/243 (72%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGL 103
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 164 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQF 223
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + KRWN K++LA++K++
Sbjct: 224 SQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVA 281
Query: 59 AKE 51
K+
Sbjct: 282 QKK 284
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 299 bits (735), Expect = 5e-81
Identities = 143/243 (58%), Positives = 178/243 (73%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 600
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 51 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGL 110
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 420
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 111 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 170
Query: 419 KGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQF 240
KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QF
Sbjct: 171 KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQF 230
Query: 239 SKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQ 60
S+YIK VT D +E +YKKAH AIR +P + KRWN K++LA++K++
Sbjct: 231 SQYIKNSVTPD-MEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVA 287
Query: 59 AKE 51
K+
Sbjct: 288 QKK 290
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 3e-41
Identities = 77/125 (61%), Positives = 91/125 (72%)
Frame = -3
Query: 758 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 579
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 578 XXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 399
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 398 LNVPH 384
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 164 bits (399), Expect = 3e-40
Identities = 77/134 (57%), Positives = 102/134 (76%)
Frame = -3
Query: 452 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 273
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 272 QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRK 93
++DED++K+QFS+YIK VT D +E +YKKAH AIR +P + KRWN K
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPK 118
Query: 92 LTLAERKNKXQAKE 51
++LA++K++ K+
Sbjct: 119 MSLAQKKDRVAQKK 132
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 105 bits (253), Expect = 1e-22
Identities = 44/55 (80%), Positives = 53/55 (96%)
Frame = -3
Query: 779 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 615
YNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 44 YNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 36.3 bits (80), Expect = 0.12
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -3
Query: 203 IEAIYKKAHEAIRADPXHXXXXXXXXXXXXKRWNXRKLTLAERKNKXQAKE 51
+E +YKKAH AIR +P + KRWN K++LA++K++ K+
Sbjct: 1 MEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,471,287
Number of Sequences: 237096
Number of extensions: 2004985
Number of successful extensions: 3851
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3841
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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