Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P10
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53...    68   1e-11
10_08_0411 - 17725661-17725842,17726066-17726104,17726379-177264...    63   2e-10
03_06_0698 + 35608666-35608709,35608810-35608958,35609493-356095...    44   2e-04
08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629...    29   3.5  
05_03_0564 - 15502458-15503303,15503394-15503474,15503572-155036...    28   8.1  
05_03_0563 - 15493570-15494415,15494506-15494586,15494684-154947...    28   8.1  
05_03_0562 - 15484733-15485578,15485669-15485749,15485847-154858...    28   8.1  

>03_01_0067 -
           538929-539143,539306-539344,539579-539635,539727-539875,
           540298-540365,542009-542093,542185-542246,542612-542700,
           543034-543088,544127-544252,544477-544576,544697-545499
          Length = 615

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
 Frame = -2

Query: 835 VIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA-------- 680
           VI F NPK QAS+ ANT+ ++G  + K+  ++LP I++QLGPD L+ L+R+A        
Sbjct: 505 VIQFQNPKVQASIGANTWVVSGTPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQVP 564

Query: 679 ---SSVAAPKPLEEDDEVPNLV--GNFDEASKQ 596
              +  +A    ++DD+VP LV    F+EA+++
Sbjct: 565 GAEAGASAGNAQDDDDDVPELVPGETFEEAAEE 597


>10_08_0411 -
           17725661-17725842,17726066-17726104,17726379-17726435,
           17726524-17726672,17727195-17727262,17727796-17727798
          Length = 165

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/66 (42%), Positives = 42/66 (63%)
 Frame = -2

Query: 835 VIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSVAAPKP 656
           VI F NPK QAS+ ANT+ ++G  + K+  ++LP I++QLGPD L+ L+R+A       P
Sbjct: 66  VIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQAP 125

Query: 655 LEEDDE 638
               +E
Sbjct: 126 GASGEE 131


>03_06_0698 +
           35608666-35608709,35608810-35608958,35609493-35609531,
           35610024-35610163,35611130-35611244,35611281-35611399,
           35611413-35611979
          Length = 390

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
 Frame = -2

Query: 757 KQTTEMLPGILSQLGPDGLNRLKRI---------ASSVAAPKPLEEDDEVPNLV--GNFD 611
           K+  ++LPGI++QLGPD +  LKRI         A+   A    E DD+VP LV   NF+
Sbjct: 64  KELQDVLPGIINQLGPDNMEHLKRIAEEMQKQVAAAGATAQAKEENDDDVPELVPGENFE 123

Query: 610 EA 605
           E+
Sbjct: 124 ES 125


>08_02_0850 +
           21862110-21862394,21862555-21862723,21862901-21862965,
           21863632-21863905,21863998-21864145,21864237-21864346,
           21864440-21864495,21864568-21864624,21864733-21864876,
           21865304-21865351
          Length = 451

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 699 FKPSGPSWLRIPGSISVVCLFSPCPVIANVFAAS 800
           F P GP W + PGS +     +PCP  A++F++S
Sbjct: 207 FYPLGPVW-QPPGSSTSKAPSAPCPPSASLFSSS 239


>05_03_0564 -
           15502458-15503303,15503394-15503474,15503572-15503620,
           15503786-15503828,15504576-15504633,15504720-15504858,
           15504980-15505107
          Length = 447

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 709 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEA 605
           +G   +  +    A  +P++ DDE  NLV NF EA
Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214


>05_03_0563 -
           15493570-15494415,15494506-15494586,15494684-15494732,
           15494898-15494940,15495688-15495745,15495832-15495970,
           15496092-15496219
          Length = 447

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 709 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEA 605
           +G   +  +    A  +P++ DDE  NLV NF EA
Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214


>05_03_0562 -
           15484733-15485578,15485669-15485749,15485847-15485895,
           15486061-15486103,15486851-15486908,15486995-15487133,
           15487255-15487382
          Length = 447

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 709 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEA 605
           +G   +  +    A  +P++ DDE  NLV NF EA
Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,364,188
Number of Sequences: 37544
Number of extensions: 327599
Number of successful extensions: 752
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)