Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P09
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   281   4e-76
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z66497-4|CAA91284.1|  401|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.       30   1.7  
L25599-3|ABN43087.1|  570|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z81544-7|CAB04432.2|  551|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  281 bits (689), Expect = 4e-76
 Identities = 134/214 (62%), Positives = 167/214 (78%)
 Frame = -1

Query: 716 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 537
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL    ++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLN---NSE 76

Query: 536 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 357
             FRKF+LIAE VQG+NVL NFH M +T DKL  +VKKW TLIEAN  VKTTDGY LRVF
Sbjct: 77  ADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVF 136

Query: 356 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 177
            I FT K     +KT Y + +++R IR +M   I ++VT  +L+EVV+KLIPDSI KDIE
Sbjct: 137 VIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIE 196

Query: 176 KACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 75
           K C  +YPL++V IRKVK++KRP+ ++ +L +LH
Sbjct: 197 KTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLH 230



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 51  GKHGDKSERPEGYEPPV 1
           G  G+K +RP+ YEPPV
Sbjct: 237 GADGEKVDRPDDYEPPV 253


>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
            C25G4.5 protein.
          Length = 1263

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 412  RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 588
            R  H    H  LS+  SMP ++  T+RP +  +  L++  + +  +   RS R   S  +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181

Query: 589  PFNPSEAI 612
              N SE++
Sbjct: 1182 VLNSSESL 1189


>Z66497-4|CAA91284.1|  401|Caenorhabditis elegans Hypothetical
           protein K08F8.2 protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +1

Query: 400 LASMRVCHFLTIHLSLSVVRSMPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 573
           +AS++    LT+ L L     +P  LQ   L+P T  S +  + ++  S S S+  S+  
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190

Query: 574 TSKTLPFNPSEA 609
           +S   PF PSE+
Sbjct: 191 SSAFHPFRPSES 202


>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
          Length = 1263

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 412  RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 588
            R  H    H  LS+  SMP ++  T+RP +  +  L++  + +  +   RS R   S  +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181

Query: 589  PFNPSEAI 612
              N SE++
Sbjct: 1182 VLNSSESL 1189


>L25599-3|ABN43087.1|  570|Caenorhabditis elegans Hypothetical
           protein F54H12.8 protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 86  STSRSRNG--ASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP 226
           S+S S N   ASST S     +    R   +P+  PWQ  Q S  +PPP
Sbjct: 94  SSSYSGNSLTASSTTSDPSIPNPTRKRITRQPNYPPWQPHQPSNPNPPP 142


>AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical
           protein C18E3.3 protein.
          Length = 893

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -1

Query: 635 VNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIA-EYVQGRNVLCNFHGMD 459
           + RT+ +KI S GL  ++ E S  ++    +A R +R F   A EY+ G N++    G  
Sbjct: 144 LKRTKESKIGS-GLPRKLEEDS--NISEFHNAHRFYRSFLEAAVEYLYGYNIMWEIDGGG 200

Query: 458 LTTDKLRW 435
              D++ W
Sbjct: 201 RLEDEINW 208


>Z81544-7|CAB04432.2|  551|Caenorhabditis elegans Hypothetical
           protein F49C5.3 protein.
          Length = 551

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -1

Query: 344 TNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELRE---VVNKLIPDSIAKDIE 177
           T + S+S     + QH Q RA++K M E +   V N ++ E   VV K + D    +I+
Sbjct: 198 TGRSSISAGFDVF-QHLQNRAVQKTMIEQLESAVRNQDVMEMGNVVKKGLEDGTLSEIQ 255


>Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical
           protein B0001.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 596 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 486
           L+G  + +S+ D +A TD E S +  R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,175,851
Number of Sequences: 27780
Number of extensions: 397857
Number of successful extensions: 1198
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)