Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P06
(844 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 486 e-138
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 3e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 3e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 5e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 5e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 1e-19
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 4e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 8e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 3e-04
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.82
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 3.3
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 4.4
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 486 bits (1198), Expect = e-138
Identities = 237/248 (95%), Positives = 246/248 (99%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 565
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 104
Query: 564 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 385
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 384 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 205
ITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Query: 204 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 25
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 24 SDYXIQKE 1
SDY IQKE
Sbjct: 285 SDYNIQKE 292
Score = 486 bits (1198), Expect = e-138
Identities = 237/248 (95%), Positives = 246/248 (99%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 565
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 564 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 385
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 384 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 205
ITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Query: 204 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 25
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 24 SDYXIQKE 1
SDY IQKE
Sbjct: 361 SDYNIQKE 368
Score = 423 bits (1041), Expect = e-119
Identities = 206/216 (95%), Positives = 215/216 (99%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 468 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 289
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 288 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 109
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 108 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQKE 1
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQKE
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Score = 365 bits (897), Expect = e-102
Identities = 177/185 (95%), Positives = 184/185 (99%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 565
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256
Query: 564 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 385
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 384 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 205
ITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 317 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Query: 204 LRGGM 190
LRGG+
Sbjct: 377 LRGGL 381
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 19 SSDTIDNVKSKIQDKEG 35
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 95 SSDTIDNVKSKIQDKEG 111
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 171 SSDTIDNVKSKIQDKEG 187
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 247 SSDTIDNVKSKIQDKEG 263
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 323 SSDTIDNVKSKIQDKEG 339
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 468 IQKESTLHLVLRLRGG-MQIFVKTLTGK 388
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 420 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 241
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 240 IQKESTLHLVLRLRGG-MQIFVKTLTGK 160
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 126 bits (303), Expect = 5e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -2
Query: 192 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 13
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 12 IQKE 1
IQKE
Sbjct: 61 IQKE 64
Score = 68.1 bits (159), Expect = 1e-12
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 616
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 19 SSDTIDNVKSKIQDKEG 35
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 468 IQKESTLHLVLRLRGG-MQIFVKTLTGK 388
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 420 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 241
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 240 IQKESTLHLVLRLRGG-MQIFVKTLTGK 160
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 126 bits (303), Expect = 5e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -2
Query: 192 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 13
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 12 IQKE 1
IQKE
Sbjct: 61 IQKE 64
Score = 68.1 bits (159), Expect = 1e-12
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 616
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 19 SSDTIDNVKSKIQDKEG 35
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 468 IQKESTLHLVLRLRGG 421
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 420 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 241
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 240 IQKESTLHLVLRLRGG 193
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 126 bits (303), Expect = 5e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -2
Query: 192 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 13
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 12 IQKE 1
IQKE
Sbjct: 61 IQKE 64
Score = 67.3 bits (157), Expect = 3e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGG 649
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 19 SSDTIDNVKSKIQDKEG 35
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 468 IQKESTLHLVLRLRGG 421
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 420 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 241
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 240 IQKESTLHLVLRLRGG 193
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 126 bits (303), Expect = 5e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -2
Query: 192 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 13
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 12 IQKE 1
IQKE
Sbjct: 61 IQKE 64
Score = 67.3 bits (157), Expect = 3e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGG 649
FAGKQ EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = -3
Query: 821 ASDTIENVKAKIQDKEG 771
+SDTI+NVK+KIQDKEG
Sbjct: 19 SSDTIDNVKSKIQDKEG 35
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 468 IQKESTLHLVLRLRGG 421
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -2
Query: 420 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 241
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 240 IQKESTLHLVLRLRGG 193
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 73.3 bits (172), Expect = 4e-14
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = -2
Query: 192 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 13
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 12 IQ 7
++
Sbjct: 61 LE 62
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2
Query: 744 FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGG 649
+AGKQ D + Y+++ S LHLVL LRGG
Sbjct: 45 YAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -2
Query: 618 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 457
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -2
Query: 390 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 229
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 8e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 648 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 469
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 468 IQKESTLHLVLRL 430
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 8e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 420 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 241
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 240 IQKESTLHLVLRL 202
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = -2
Query: 192 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 13
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 12 IQ 7
IQ
Sbjct: 64 IQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -2
Query: 621 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 448
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -2
Query: 393 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 220
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -2
Query: 165 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQ 7
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIK 62
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.1 bits (62), Expect = 0.82
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -1
Query: 271 GRRTHVVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHN*ER 116
G R V L ++H P + A+ +EN HHF R F + +R
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFANAIDR 194
Score = 29.1 bits (62), Expect = 0.82
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -1
Query: 499 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGH 356
G R V L ++H P + A+ +EN HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = -1
Query: 727 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRXNSDRKDHHFGSRSFGH 584
G R V L ++H P + A+ + N HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -2
Query: 645 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 472
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 471 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 382
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -2
Query: 417 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 244
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 243 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 154
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 196 STKTQYKMECGFFLNV 243
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 424 STKTQYKMECGFFLNV 471
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 652 STKTQYKMECGFFLNV 699
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,602,501
Number of Sequences: 5004
Number of extensions: 77128
Number of successful extensions: 301
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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