Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P05
         (819 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   109   3e-26
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    73   3e-15
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    35   8e-04
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      28   0.12 

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  109 bits (262), Expect = 3e-26
 Identities = 54/144 (37%), Positives = 81/144 (56%)
 Frame = -3

Query: 814 VVSEVLRLWPPVIALDRXCVKXYNLGKPNDKSKEDFIIRKDVAVGIPVWGLHRDPEFFPN 635
           V  E LR++PP   L R  +  Y     ND       I K++ + IP + +HRD   +PN
Sbjct: 359 VFKETLRMYPPASILMRKAISDYTF---NDTK---ITIPKEMKIWIPAFAIHRDSAIYPN 412

Query: 634 PLKFDPERFSEENKHNIKPFSYMPFGLGPRNCIGSRFALCEVKVMTYQLLQHMEISPCEK 455
           P  FDPERF ++   +  P  Y+PFG GPRNCIG+RFA+ + KV    +L++ ++  CEK
Sbjct: 413 PDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKVEVCEK 472

Query: 454 TCIPSKLSKETFNLRLEGGHWIRL 383
           T IP +     F L  + G ++++
Sbjct: 473 TIIPYEFDPGAFLLSPKDGIYLKI 496


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 72.9 bits (171), Expect = 3e-15
 Identities = 35/112 (31%), Positives = 60/112 (53%)
 Frame = -3

Query: 805 EVLRLWPPVIALDRXCVKXYNLGKPNDKSKEDFIIRKDVAVGIPVWGLHRDPEFFPNPLK 626
           E LR++PPV  + R       L      +  D+ I     V I  + LHR P  +PNP  
Sbjct: 406 ETLRMYPPVPLIAREIKTDLKL------ASGDYTIPAGCTVVIGTFKLHRQPHIYPNPDV 459

Query: 625 FDPERFSEENKHNIKPFSYMPFGLGPRNCIGSRFALCEVKVMTYQLLQHMEI 470
           FDP+ F  E   N   ++++PF  GPR+C+G ++A+ ++K++   +L++  +
Sbjct: 460 FDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRV 511


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 35.1 bits (77), Expect = 8e-04
 Identities = 29/114 (25%), Positives = 51/114 (44%)
 Frame = -3

Query: 811 VSEVLRLWPPVIALDRXCVKXYNLGKPNDKSKEDFIIRKDVAVGIPVWGLHRDPEFFPNP 632
           ++E LRL P    + R       L +P + S   + +     V +  W    + E F + 
Sbjct: 385 ITESLRLIPTTTCIARI------LDEPIELS--GYRLTAGTVVLLHTWIAGLNEENFKDA 436

Query: 631 LKFDPERFSEENKHNIKPFSYMPFGLGPRNCIGSRFALCEVKVMTYQLLQHMEI 470
            K+ PER++     +  P    PFG G R C G RF    ++++  ++++  EI
Sbjct: 437 KKYLPERWTTPTTPH-SPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEI 489


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 500 DIPTPPAHGDISVREDLHSLETQQGDFQPSP 408
           D+ +PP H D+ + +  H L   Q  +Q SP
Sbjct: 57  DLSSPPEHRDLPIYQSHHHLHHHQVLYQQSP 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,283
Number of Sequences: 438
Number of extensions: 4725
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)