Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P04
(888 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5KTM1 Cluster: Reverse transcriptase; n=1; Bombyx mori... 52 3e-05
UniRef50_UPI00000043F9 Cluster: PREDICTED: hypothetical protein ... 48 4e-04
UniRef50_Q8GAU9 Cluster: ORF1, czcR genes, pol, ftsZ, BMEI0172, ... 41 0.037
UniRef50_A3FMR2 Cluster: Gag-like protein; n=1; Biomphalaria gla... 40 0.11
UniRef50_Q9W3D3 Cluster: CG12737-PA, isoform A; n=6; Sophophora|... 39 0.20
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p... 38 0.26
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 38 0.26
UniRef50_Q24362 Cluster: Putative ORF1; n=2; melanogaster subgro... 38 0.26
UniRef50_Q171K9 Cluster: Toll; n=5; Diptera|Rep: Toll - Aedes ae... 38 0.34
UniRef50_Q16G62 Cluster: Sprouty; n=1; Aedes aegypti|Rep: Sprout... 38 0.34
UniRef50_Q9GP61 Cluster: Gag protein; n=1; Drosophila melanogast... 37 0.60
UniRef50_Q22BW2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.60
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 37 0.79
UniRef50_Q17M25 Cluster: Putative uncharacterized protein; n=1; ... 37 0.79
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 37 0.79
UniRef50_Q9U4W2 Cluster: Gag-like protein; n=1; Aedes aegypti|Re... 36 1.4
UniRef50_Q179G6 Cluster: Putative uncharacterized protein; n=3; ... 36 1.4
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 36 1.8
UniRef50_A7S7T3 Cluster: Predicted protein; n=2; Nematostella ve... 35 2.4
UniRef50_UPI000049A2A5 Cluster: DENN domain protein; n=3; Entamo... 35 3.2
UniRef50_Q5BT09 Cluster: SJCHGC03015 protein; n=1; Schistosoma j... 34 4.2
UniRef50_Q2U1R2 Cluster: Predicted protein; n=1; Aspergillus ory... 34 4.2
UniRef50_A5K7W8 Cluster: Putative uncharacterized protein; n=2; ... 34 5.6
UniRef50_A4VEH5 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q54NQ8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_UPI0000499B10 Cluster: conserved hypothetical protein; ... 33 9.7
UniRef50_A2CEI9 Cluster: Novel protein; n=2; Danio rerio|Rep: No... 33 9.7
UniRef50_Q10WE0 Cluster: Sensor protein; n=1; Trichodesmium eryt... 33 9.7
UniRef50_Q2QZT6 Cluster: Zinc knuckle family protein, expressed;... 33 9.7
UniRef50_Q6GV84 Cluster: Gag protein; n=1; Oikopleura dioica|Rep... 33 9.7
UniRef50_Q54FM3 Cluster: EIF2B GDP-GTP exchange factor; n=1; Dic... 33 9.7
>UniRef50_Q5KTM1 Cluster: Reverse transcriptase; n=1; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 535
Score = 51.6 bits (118), Expect = 3e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 1 ETVVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRSS 153
ET+ L+F G LP+ VYL + V+ YI+P QC C R+GH C S+
Sbjct: 209 ETIRLSFKGNSLPEYVYLFNTRVKVEAYIFPVTQCSNCWRFGHSAKYCPST 259
Score = 39.5 bits (88), Expect = 0.11
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 201 NIEEENVICCLCSGSHFATSRKCPEFFRQKSIKESMAKSCLSYAEALKLHPP 356
N E + C C G+H A ++ CP + +++ I+E M++ +Y +A ++ P
Sbjct: 272 NCETNSFKCINCKGNHMALAKTCPIYLKERRIREIMSEFNCTYRKASLMYVP 323
>UniRef50_UPI00000043F9 Cluster: PREDICTED: hypothetical protein
LOC368413; n=1; Danio rerio|Rep: PREDICTED: hypothetical
protein LOC368413 - Danio rerio
Length = 289
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 1 ETVVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRSSPR 159
+TV+L FD V+PK+V+L + + PV LY+ ++C+ C R+ H C R
Sbjct: 136 KTVLLEFDEVVVPKKVFLEFVNYPVRLYVPKPLRCYNCQRFDHTAKICNRQRR 188
Score = 34.3 bits (75), Expect = 4.2
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 CCLCSGSHFATSRKCPEFFRQKSIKESMAKSCLSYAEALKLHPPVGRSYSDVLSTPISPP 404
CC C G+H C R+ +I++ + ++YAEA+K+ ++V+
Sbjct: 209 CCNCGGAHNVAFSGCEVMQRETNIQKIRVEKKITYAEAVKVSREKKTKENEVVMDSQQQD 268
Query: 405 ISH-IKVSNPKSENV 446
S I V N ++ NV
Sbjct: 269 NSEKIYVKNKRTSNV 283
>UniRef50_Q8GAU9 Cluster: ORF1, czcR genes, pol, ftsZ, BMEI0172,
RP741, sdhB, WD0728, pgpA, g3pdh pseudogene, complete
and; n=1; Wolbachia endosymbiont of Callosobruchus
chinensis|Rep: ORF1, czcR genes, pol, ftsZ, BMEI0172,
RP741, sdhB, WD0728, pgpA, g3pdh pseudogene, complete
and - Wolbachia endosymbiont of Callosobruchus chinensis
Length = 387
Score = 41.1 bits (92), Expect = 0.037
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 10 VLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQC 144
+LTF+ LPK + + +L V YI ++CF C ++GH ++C
Sbjct: 162 ILTFNKPTLPKEIKVAMYNLKVRPYIPSPLRCFNCQKFGHTTTRC 206
>UniRef50_A3FMR2 Cluster: Gag-like protein; n=1; Biomphalaria
glabrata|Rep: Gag-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 461
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 4 TVVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCR 147
T++LTF + P+ V Y +PV YI ++CF+C YGH + C+
Sbjct: 160 TIILTFGTRTPPEYVKAGYLRVPVRPYIPNPMRCFKCQGYGHGAAVCK 207
>UniRef50_Q9W3D3 Cluster: CG12737-PA, isoform A; n=6;
Sophophora|Rep: CG12737-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1671
Score = 38.7 bits (86), Expect = 0.20
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 AEALKLHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLS-K 506
A L H P G ++ L + + + P + + + F P +QLS +
Sbjct: 312 AICLLSHHPFGDTFDKWLKYLHRMVLYDVNIPIPVERYITQLLDEVPFPAPSIHLQLSSE 371
Query: 507 GFDKIAHAKLTNEYDIPLPTVGTGYDHHSLQNLSTRDLILTLMNFLLQSSQVISEHSLPS 686
D+I LT D PLP G G+ H LQNL T + + L+ L + Q I HSL
Sbjct: 372 SNDRIL---LTQPEDSPLPRSGAGF-HILLQNLGTDNCLHVLL--LALTEQKILIHSLRP 425
Query: 687 NTATLLTD 710
T T + +
Sbjct: 426 ATLTAVAE 433
>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 963
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 745 QIIQWNCRSISSKKCDIIYLANKYQPFLISLQETWL 852
+I+QWNCRS+ K ++ L N Y + LQETWL
Sbjct: 8 KILQWNCRSLRGKTYELESLLNNYN--VACLQETWL 41
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 38.3 bits (85), Expect = 0.26
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 733 MDQSQIIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLRPGFNFXIPKYS 888
+D I+ WN R++ +K+ ++I + + ETWL F IP+Y+
Sbjct: 9 IDNLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRFNIPEYT 60
>UniRef50_Q24362 Cluster: Putative ORF1; n=2; melanogaster
subgroup|Rep: Putative ORF1 - Drosophila melanogaster
(Fruit fly)
Length = 426
Score = 38.3 bits (85), Expect = 0.26
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 7 VVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRS 150
+++TF+ LP+ V + Y ++ V YI ++C +C R+GH C+S
Sbjct: 156 IIITFESHKLPEIVRIGYETVRVRDYIPLPLRCKKCLRFGHPTPICKS 203
>UniRef50_Q171K9 Cluster: Toll; n=5; Diptera|Rep: Toll - Aedes
aegypti (Yellowfever mosquito)
Length = 1258
Score = 37.9 bits (84), Expect = 0.34
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +3
Query: 204 IEEE--NVICCL-CSGS-HFATSRKCPEFFRQKSIKESMAKSCLSYAEALKLHPPVGRSY 371
+EE+ N + CL C S H T CP R+ SIK M+K L+Y EA +L P+ Y
Sbjct: 49 VEEQCPNEVKCLHCRKSDHRTTDPNCPSRQREISIKTMMSKKNLTYVEARELIAPLTTQY 108
Query: 372 SDVLS 386
DVL+
Sbjct: 109 -DVLA 112
>UniRef50_Q16G62 Cluster: Sprouty; n=1; Aedes aegypti|Rep: Sprouty -
Aedes aegypti (Yellowfever mosquito)
Length = 596
Score = 37.9 bits (84), Expect = 0.34
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 345 LHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIA 524
L+P + + S +T S P++ + P++E + Y T F + +G I
Sbjct: 162 LNPSIETTASTTTTTSASSPVT-LAAPRPENERLTNEYVDTPFSRLSPASNRQRGQHAIG 220
Query: 525 HAKLTNEYDIPLPTVGTGYD-HHSLQ-NLSTRDLILTLMNFLLQSSQVISEHSLP-SNTA 695
A T P+P+V + D HH L + T + + + +S +S P +TA
Sbjct: 221 SAATTGSATTPMPSVASSIDRHHQLSVSQPTNNRLHSPSTIHSSNSTTVSTIGKPIGSTA 280
Query: 696 TLLT 707
T T
Sbjct: 281 TTTT 284
>UniRef50_Q9GP61 Cluster: Gag protein; n=1; Drosophila
melanogaster|Rep: Gag protein - Drosophila melanogaster
(Fruit fly)
Length = 433
Score = 37.1 bits (82), Expect = 0.60
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 7 VVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRSSP 156
V++TFD LP ++ + ++++ V YI ++C C GH C++ P
Sbjct: 172 VLVTFDRFTLPSKLTVSWHTVKVSEYIPNPMRCKSCQLLGHTSKHCKNPP 221
>UniRef50_Q22BW2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 454
Score = 37.1 bits (82), Expect = 0.60
Identities = 24/89 (26%), Positives = 46/89 (51%)
Frame = +3
Query: 285 QKSIKESMAKSCLSYAEALKLHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKK 464
Q++ KES C+S E L+ + P ++ + P +PP S+ SNP + N + +K
Sbjct: 276 QETNKESNQIKCVSIQEGLQQYSPSKQNSIN----PETPP-SNSNNSNPNNNNNQEKAQK 330
Query: 465 TVFLKPKTPVQLSKGFDKIAHAKLTNEYD 551
++ +PK +Q S+ F + +E++
Sbjct: 331 SILKRPKILIQQSENFINLNKIIKNDEFE 359
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 36.7 bits (81), Expect = 0.79
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 748 IIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLRPGFNFXIP 879
IIQWN + + ++ L KY P +ISLQET ++ N P
Sbjct: 5 IIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTP 48
>UniRef50_Q17M25 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 318
Score = 36.7 bits (81), Expect = 0.79
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 7 VVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRSSPR 159
V + G +P+ + + ++P +L+ I C +C RYGH C PR
Sbjct: 179 VSIAVQGSKIPESLIVKGETVPFELFERKPIYCIRCLRYGHRTYDCMRKPR 229
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 36.7 bits (81), Expect = 0.79
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 742 SQIIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLRPGFNF 870
S+I+QWNCR + + ++ L + P + LQET+L+ +F
Sbjct: 3 SRIVQWNCRGLKANYEEMQLLMDSETPVAVCLQETFLKDCISF 45
>UniRef50_Q9U4W2 Cluster: Gag-like protein; n=1; Aedes aegypti|Rep:
Gag-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 496
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 4 TVVLTFDGQVLPKRVYLCYNSLPVDLYIYPT-IQCFQCCRYGHIKSQCR 147
T++LT G V+P+ +Y+ + + YPT + C+ C +GH +++C+
Sbjct: 165 TIILTLQGTVIPEDIYIGWIRCRTRPF-YPTPMLCYCCWDFGHTRARCQ 212
>UniRef50_Q179G6 Cluster: Putative uncharacterized protein; n=3;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 324
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 13 LTFDGQVLPKRVYLCYNS--LPVDLYIYPTIQCFQCCRYGHIKSQCRSSPR 159
+TF G LP YLC N L V LY + C +C R GH C PR
Sbjct: 163 VTFAGTALPD--YLCINGALLKVRLYSPKIMLCRKCGRLGHTSKYCTLKPR 211
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 760 NCRSISSKKCDIIYLANKYQPFLISLQETW 849
N RSI +KK D+ A+ YQP LI + E W
Sbjct: 5 NARSICNKKTDLALFASIYQPSLIMISEAW 34
>UniRef50_A7S7T3 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 572
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +1
Query: 316 VVYHMQKP*NYILLLVDHIQMFCPLQYLLLYHILKFQIQSLKMSINLTKKQFFSNLK 486
V+YHMQ YI +++ H+Q+ ++LYH ++ ++Q + M ++ + +F L+
Sbjct: 123 VLYHMQLEVQYINMVLYHMQLEVQYINIVLYH-MQLEVQYINMILDTIRLKFLERLQ 178
>UniRef50_UPI000049A2A5 Cluster: DENN domain protein; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: DENN domain protein -
Entamoeba histolytica HM-1:IMSS
Length = 991
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +1
Query: 277 FLDKNPSKNLWPKVVYHMQKP*NYILLLVDHIQMFCPLQYLLLYHILKFQIQSLKMSINL 456
F+DKNP+ P + KP NYIL++V H +F PL+ LY + K + + +
Sbjct: 6 FIDKNPTTTYNPNL---QTKPTNYILVIVIHSGVFNPLE-TGLYCVCKIDDKKYRSLTKV 61
Query: 457 TKKQFFS 477
K F+
Sbjct: 62 GNKPVFN 68
>UniRef50_Q5BT09 Cluster: SJCHGC03015 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03015 protein - Schistosoma
japonicum (Blood fluke)
Length = 59
Score = 34.3 bits (75), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 52 LCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCR 147
L Y S V ++ T+QC++CC GH+ CR
Sbjct: 2 LGYMSYTVKAFMPNTLQCYRCCVNGHVAEVCR 33
>UniRef50_Q2U1R2 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 321
Score = 34.3 bits (75), Expect = 4.2
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 333 EALKLHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTV 470
E LKL+PP +S +L+ PI ++ + +S P+ + + Y+ T+
Sbjct: 265 ELLKLYPPSTSRHSIILTIPIEDRVATVVISIPREDAIRFGYESTL 310
>UniRef50_A5K7W8 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1034
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3
Query: 360 GRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPV 494
G S ++V S + P + IKV PK EN+NK +KK L PKTP+
Sbjct: 796 GSSSNNVASKTVKPLLK-IKVE-PKKENLNKLFKK---LSPKTPL 835
>UniRef50_A4VEH5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 210
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 367 HIQMFCPLQYLLLYHILKFQIQSLKMSINLTKKQFFSNLKH 489
H+Q+ L LLLYH+L F +Q S K F +L H
Sbjct: 71 HLQLIHLLLDLLLYHLLHFLVQDFSFSFQFQKALLFVHLLH 111
>UniRef50_Q54NQ8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 784
Score = 33.5 bits (73), Expect = 7.4
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +3
Query: 384 STPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLP 563
S ISP S+IK S P ++ YK ++F+ K PV ++ G L + D P+P
Sbjct: 459 SPSISPSSSNIK-SEPNFARID--YKTSMFISNK-PVAITTGKVATTQIHLRDALDNPVP 514
Query: 564 TVGTGYDHHSLQNLSTRDLILTLM 635
T T + +S+ L LTL+
Sbjct: 515 TNLTSSNPSGFGPISSSPLHLTLL 538
>UniRef50_UPI0000499B10 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 293
Score = 33.1 bits (72), Expect = 9.7
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = -3
Query: 223 MTFSSSILQLSP*VAITTF---KTXGEKTYIVI*CDHIDSIENTE*LGICTDQ--QVKNY 59
+ FS+ +LQL P IT F T K YI I DH+D + L +C D+ Q+K Y
Sbjct: 152 LAFSTHLLQLLPLSLITFFFSLVTDVPKQYIPILKDHLDPQMTGQMLSLCKDEGVQIKEY 211
>UniRef50_A2CEI9 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 243
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 447 NKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDI-PLPTVGTGYDHHSLQNL 605
NK+ K+T L PK + ++ +HA +TN+ + P P + Y H Q +
Sbjct: 7 NKNLKQTDLLSPKKEINTDSENEESSHAGITNQETMAPTPKLEENYSKHPQQEM 60
>UniRef50_Q10WE0 Cluster: Sensor protein; n=1; Trichodesmium
erythraeum IMS101|Rep: Sensor protein - Trichodesmium
erythraeum (strain IMS101)
Length = 1878
Score = 33.1 bits (72), Expect = 9.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 208 KRKMSYVAFVLDHISPLAANALNFLDKNPSKNLWPKVVYHMQKP*NYILLLVDHIQMFCP 387
K K S LD+I P N LNFL KN +N ++++ +Y L L+ +CP
Sbjct: 592 KPKNSLGKNFLDYIHPEDINKLNFLTKNHPENTELAIIHNKLVADSYQLQLLTKTGGYCP 651
Query: 388 LQ 393
++
Sbjct: 652 VK 653
>UniRef50_Q2QZT6 Cluster: Zinc knuckle family protein, expressed;
n=2; Oryza sativa|Rep: Zinc knuckle family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 935
Score = 33.1 bits (72), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRSSPRLF*MW 174
+CF C GH+K+ C+ +PR + W
Sbjct: 93 RCFCCLGLGHLKADCKGAPRCYRCW 117
>UniRef50_Q6GV84 Cluster: Gag protein; n=1; Oikopleura dioica|Rep:
Gag protein - Oikopleura dioica (Tunicate)
Length = 385
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 37 PKRVYLCYNSLPVDLY--IYPTIQCFQCCRYGHIKSQC 144
P RV C N Y I P IQC++C +GHI C
Sbjct: 320 PPRVPFCINCGTQGHYKAICPKIQCYECKNFGHIGRNC 357
>UniRef50_Q54FM3 Cluster: EIF2B GDP-GTP exchange factor; n=1;
Dictyostelium discoideum AX4|Rep: EIF2B GDP-GTP exchange
factor - Dictyostelium discoideum AX4
Length = 619
Score = 33.1 bits (72), Expect = 9.7
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 252 ATSRKCPEFFRQKSIKESMAKSCLSYAEALKLHPPVGRSYSDVLSTPISPPISHIKVSNP 431
ATS K + ++ ++K S E P+G + S STP S P S S P
Sbjct: 99 ATSPKDSSIIGKNNVNSDLSKVSSSLNELKFEKQPIGSTSSTPTSTPSSTPSSSTPSSTP 158
Query: 432 KSENVNKSYKK 464
+ N N ++
Sbjct: 159 STPNTNSQQQQ 169
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,987,307
Number of Sequences: 1657284
Number of extensions: 15848313
Number of successful extensions: 40332
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 38463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40300
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -