Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P04
(888 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 30 0.11
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 28 0.44
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 27 0.58
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 27 0.76
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 1.0
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 1.3
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 2.3
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 25 2.3
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 3.1
AF457563-1|AAL68793.1| 48|Anopheles gambiae hypothetical prote... 25 4.1
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 4.1
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 25 4.1
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 25 4.1
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 25 4.1
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 4.1
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 24 7.1
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 24 7.1
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 9.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 9.4
AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskele... 23 9.4
AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative cytoskel... 23 9.4
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 23 9.4
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 29.9 bits (64), Expect = 0.11
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRSS 153
+CF+C GHI S CRS+
Sbjct: 507 RCFRCLEMGHIASNCRST 524
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 27.9 bits (59), Expect = 0.44
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRSSPR 159
QC++C YGH ++C R
Sbjct: 213 QCYRCYEYGHTAARCHGKDR 232
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 43 RVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRSSPR 159
++ + ++ PV + I P +CF+C GH C+ R
Sbjct: 399 KIRIGWSICPVKIQI-PKRRCFKCWETGHFSRDCKGPDR 436
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 27.1 bits (57), Expect = 0.76
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 103 CFQCCRYGHIKSQCRSS 153
CF C R GH +CRS+
Sbjct: 377 CFNCLRKGHSARECRST 393
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 26.6 bits (56), Expect = 1.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRS 150
+C++C GHI +CRS
Sbjct: 363 RCYRCLERGHIARECRS 379
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 1.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRSS 153
+C++C GH+ CRSS
Sbjct: 476 RCYRCLERGHLAHACRSS 493
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 25.4 bits (53), Expect = 2.3
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 97 IQCFQCCRYGHIKSQCRS 150
++C++C +GH CRS
Sbjct: 549 LRCYRCLEHGHNARDCRS 566
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 31 VLPKRVYLCYNSLPVDLYIYPTIQ---CFQCCRYGHIKSQCRSSPR 159
++ KR+ + ++S V P+ + CF+C GH+ +C+ + R
Sbjct: 209 LIDKRLIIGFSSCKVREAPKPSAESRRCFRCLERGHMVRECQGTNR 254
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 25.0 bits (52), Expect = 3.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRSSPR 159
+CF+C GHI + C R
Sbjct: 465 RCFRCLERGHIAATCTGEDR 484
>AF457563-1|AAL68793.1| 48|Anopheles gambiae hypothetical protein
16 protein.
Length = 48
Score = 24.6 bits (51), Expect = 4.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 303 SMAKSCLSYAEALKLHPPVGRSYSDVLSTPISPPISHIKVS 425
++A L+ A L L PP +YS L+ P P +SH+ ++
Sbjct: 7 TVAVLLLAAAALLLLLPP---AYSTTLTPPAPPRLSHLGIT 44
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 24.6 bits (51), Expect = 4.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +1
Query: 97 IQCFQCCRYGHIKSQCRS 150
++C++C GH+ C S
Sbjct: 404 LRCYRCLERGHVSRDCHS 421
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 24.6 bits (51), Expect = 4.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +1
Query: 97 IQCFQCCRYGHIKSQCRSSPR 159
++CF+C GH + C R
Sbjct: 289 VRCFRCLERGHTTADCAGEDR 309
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 24.6 bits (51), Expect = 4.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRSSPRLF*MW 174
+C++C + GH CR R W
Sbjct: 276 KCYKCWKVGHTSYHCREPDRSNLCW 300
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 24.6 bits (51), Expect = 4.1
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 43 RVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQC 144
+V + ++ PV + I P+ +C++C + HI C
Sbjct: 412 KVQIGWSVCPVRINI-PSRRCYRCWQTDHISQDC 444
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 24.6 bits (51), Expect = 4.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 97 IQCFQCCRYGHIKSQCRS 150
++C++C GH CRS
Sbjct: 660 VRCYRCLELGHWAHDCRS 677
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.8 bits (49), Expect = 7.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 179 HYHI*NXRGEDLHCDLM*PYRQH*KH 102
H+H RG DL D+ PY H H
Sbjct: 437 HHHSALVRGMDLMDDMPLPYHDHNHH 462
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 23.8 bits (49), Expect = 7.1
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +1
Query: 97 IQCFQCCRYGHIKSQCRSSPR 159
++CF+C + GH +C R
Sbjct: 328 VKCFKCWKLGHKGFECTGQDR 348
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 9.4
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -1
Query: 576 LFQLLVVEYHI--HWLILHELFCQN 508
LF+LLV WL LH+L+C N
Sbjct: 1531 LFELLVRNGSSGERWLRLHDLYCLN 1555
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.4 bits (48), Expect = 9.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 280 KNSGHLRLVAKCDPEQRQHMTFSSSILQL 194
K H RLV +CD + Q +SI +L
Sbjct: 617 KRQEHQRLVRECDKIRNQRGQIENSIKEL 645
>AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskeletal
regulator protein.
Length = 135
Score = 23.4 bits (48), Expect = 9.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 132 NVTISTALKTLNSWVYV 82
NVT+S AL+ L S VY+
Sbjct: 42 NVTLSNALRQLASLVYI 58
>AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative
cytoskeletal regulator protein.
Length = 135
Score = 23.4 bits (48), Expect = 9.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 132 NVTISTALKTLNSWVYV 82
NVT+S AL+ L S VY+
Sbjct: 42 NVTLSNALRQLASLVYI 58
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.4 bits (48), Expect = 9.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 100 QCFQCCRYGHIKSQCRS 150
+C++C GH+ C+S
Sbjct: 389 RCYRCLERGHLARDCQS 405
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 866,459
Number of Sequences: 2352
Number of extensions: 18814
Number of successful extensions: 49
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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