Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_P04
(888 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17918-1|CAA76938.1| 1441|Drosophila melanogaster CRAG protein p... 39 0.011
AE014298-1214|AAF46397.3| 1644|Drosophila melanogaster CG12737-P... 39 0.011
AE014298-1213|AAF46398.3| 1671|Drosophila melanogaster CG12737-P... 39 0.011
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 38 0.014
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 38 0.014
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 37 0.032
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 37 0.032
BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p pro... 31 2.8
AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p pro... 31 2.8
AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA... 31 2.8
AY070613-1|AAL48084.1| 995|Drosophila melanogaster RE71565p pro... 30 3.7
AE014296-740|AAF47825.3| 353|Drosophila melanogaster CG14987-PA... 30 3.7
AE014296-739|AAS64968.1| 429|Drosophila melanogaster CG14987-PB... 30 3.7
AE013599-2173|AAF58067.2| 995|Drosophila melanogaster CG8414-PA... 30 3.7
BT030441-1|ABO52861.1| 759|Drosophila melanogaster RE42355p pro... 29 6.5
AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p pro... 29 6.5
AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p pro... 29 6.5
AY052025-1|AAK93449.1| 1183|Drosophila melanogaster LD47622p pro... 29 6.5
AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,... 29 6.5
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,... 29 6.5
AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,... 29 6.5
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 8.6
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 29 8.6
>Y17918-1|CAA76938.1| 1441|Drosophila melanogaster CRAG protein
protein.
Length = 1441
Score = 38.7 bits (86), Expect = 0.011
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 AEALKLHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLS-K 506
A L H P G ++ L + + + P + + + F P +QLS +
Sbjct: 202 AICLLSHHPFGDTFDKWLKYLHRMVLYDVNIPIPVERYITQLLDEVPFPAPSIHLQLSSE 261
Query: 507 GFDKIAHAKLTNEYDIPLPTVGTGYDHHSLQNLSTRDLILTLMNFLLQSSQVISEHSLPS 686
D+I LT D PLP G G+ H LQNL T + + L+ L + Q I HSL
Sbjct: 262 SNDRIL---LTQPEDSPLPRSGAGF-HILLQNLGTDNCLHVLL--LALTEQKILIHSLRP 315
Query: 687 NTATLLTD 710
T T + +
Sbjct: 316 ATLTAVAE 323
>AE014298-1214|AAF46397.3| 1644|Drosophila melanogaster CG12737-PB,
isoform B protein.
Length = 1644
Score = 38.7 bits (86), Expect = 0.011
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 AEALKLHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLS-K 506
A L H P G ++ L + + + P + + + F P +QLS +
Sbjct: 312 AICLLSHHPFGDTFDKWLKYLHRMVLYDVNIPIPVERYITQLLDEVPFPAPSIHLQLSSE 371
Query: 507 GFDKIAHAKLTNEYDIPLPTVGTGYDHHSLQNLSTRDLILTLMNFLLQSSQVISEHSLPS 686
D+I LT D PLP G G+ H LQNL T + + L+ L + Q I HSL
Sbjct: 372 SNDRIL---LTQPEDSPLPRSGAGF-HILLQNLGTDNCLHVLL--LALTEQKILIHSLRP 425
Query: 687 NTATLLTD 710
T T + +
Sbjct: 426 ATLTAVAE 433
>AE014298-1213|AAF46398.3| 1671|Drosophila melanogaster CG12737-PA,
isoform A protein.
Length = 1671
Score = 38.7 bits (86), Expect = 0.011
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 AEALKLHPPVGRSYSDVLSTPISPPISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLS-K 506
A L H P G ++ L + + + P + + + F P +QLS +
Sbjct: 312 AICLLSHHPFGDTFDKWLKYLHRMVLYDVNIPIPVERYITQLLDEVPFPAPSIHLQLSSE 371
Query: 507 GFDKIAHAKLTNEYDIPLPTVGTGYDHHSLQNLSTRDLILTLMNFLLQSSQVISEHSLPS 686
D+I LT D PLP G G+ H LQNL T + + L+ L + Q I HSL
Sbjct: 372 SNDRIL---LTQPEDSPLPRSGAGF-HILLQNLGTDNCLHVLL--LALTEQKILIHSLRP 425
Query: 687 NTATLLTD 710
T T + +
Sbjct: 426 ATLTAVAE 433
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 38.3 bits (85), Expect = 0.014
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 7 VVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRS 150
+++TF+ LP+ V + Y ++ V YI ++C +C R+GH C+S
Sbjct: 156 IIITFESHKLPEIVRIGYETVRVRDYIPLPLRCKKCLRFGHPTPICKS 203
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 38.3 bits (85), Expect = 0.014
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 733 MDQSQIIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLRPGFNFXIPKYS 888
+D I+ WN R++ +K+ ++I + + ETWL F IP+Y+
Sbjct: 9 IDNLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRFNIPEYT 60
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 37.1 bits (82), Expect = 0.032
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 748 IIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLRPGFNFXIP 879
IIQWN + + ++ L KY P +ISLQET ++ N P
Sbjct: 5 IIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTP 48
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 37.1 bits (82), Expect = 0.032
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 7 VVLTFDGQVLPKRVYLCYNSLPVDLYIYPTIQCFQCCRYGHIKSQCRSSP 156
V++TFD LP ++ + ++++ V YI ++C C GH C++ P
Sbjct: 172 VLVTFDRFTLPSKLTVSWHTVKVSEYIPNPMRCKSCQLLGHTSKHCKNPP 221
Score = 32.7 bits (71), Expect = 0.70
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 219 VICCLCSGSHFATSRKCPEFFRQKSIKESMAKSCLSYAEA 338
+ C C+G H A+S +CP++ QK + S+ EA
Sbjct: 239 IFCANCTGQHPASSPECPQYQTQKQLLHIKTSKKCSFYEA 278
>BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p protein.
Length = 1567
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -3
Query: 493 TGVLGLRKTVFL*DLLTFSDFGFETLICDIGGDIGVDRTSEYDLPTGGCNFRASAYDRQL 314
+GV+ +R FL L DFGF+ + C G D+G + + ++ +F SA R L
Sbjct: 951 SGVIPIRIEGFLIGSLPCEDFGFKVMDC-AGFDLGENEARKVEI-AFSADFTTSAVKRSL 1008
Query: 313 LAIDSL 296
+ +L
Sbjct: 1009 TLLTNL 1014
>AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p protein.
Length = 1561
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -3
Query: 493 TGVLGLRKTVFL*DLLTFSDFGFETLICDIGGDIGVDRTSEYDLPTGGCNFRASAYDRQL 314
+GV+ +R FL L DFGF+ + C G D+G + + ++ +F SA R L
Sbjct: 945 SGVIPIRIEGFLIGSLPCEDFGFKVMDC-AGFDLGENEARKVEI-AFSADFTTSAVKRSL 1002
Query: 313 LAIDSL 296
+ +L
Sbjct: 1003 TLLTNL 1008
>AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA
protein.
Length = 1567
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -3
Query: 493 TGVLGLRKTVFL*DLLTFSDFGFETLICDIGGDIGVDRTSEYDLPTGGCNFRASAYDRQL 314
+GV+ +R FL L DFGF+ + C G D+G + + ++ +F SA R L
Sbjct: 951 SGVIPIRIEGFLIGSLPCEDFGFKVMDC-AGFDLGENEARKVEI-AFSADFTTSAVKRSL 1008
Query: 313 LAIDSL 296
+ +L
Sbjct: 1009 TLLTNL 1014
>AY070613-1|AAL48084.1| 995|Drosophila melanogaster RE71565p
protein.
Length = 995
Score = 30.3 bits (65), Expect = 3.7
Identities = 26/100 (26%), Positives = 43/100 (43%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
P+S+ VSNP S K KK L K PV S A + +P+P V
Sbjct: 81 PLSN-NVSNPDSSPSQKRLKKDNTLPKKNPVNKSSNVAAKKSAATSKSAKLPIPKV---- 135
Query: 582 DHHSLQNLSTRDLILTLMNFLLQSSQVISEHSLPSNTATL 701
HS+ L+ + + N ++S + +H + N +++
Sbjct: 136 --HSINELAPKKTKVKTPNKTKEAS-LSKKHKVNGNKSSM 172
>AE014296-740|AAF47825.3| 353|Drosophila melanogaster CG14987-PA,
isoform A protein.
Length = 353
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 216 NVICCLCSGSHFATSRKCPEFFRQKSIKESM-AKSCLSYAEAL 341
+VIC C GS SR+ P R+ ++ E + K C + E L
Sbjct: 23 SVICIFCFGSFIKLSRRWPHIIRETALCERIFLKPCYANQEGL 65
>AE014296-739|AAS64968.1| 429|Drosophila melanogaster CG14987-PB
protein.
Length = 429
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 216 NVICCLCSGSHFATSRKCPEFFRQKSIKESM-AKSCLSYAEAL 341
+VIC C GS SR+ P R+ ++ E + K C + E L
Sbjct: 99 SVICIFCFGSFIKLSRRWPHIIRETALCERIFLKPCYANQEGL 141
>AE013599-2173|AAF58067.2| 995|Drosophila melanogaster CG8414-PA
protein.
Length = 995
Score = 30.3 bits (65), Expect = 3.7
Identities = 26/100 (26%), Positives = 43/100 (43%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
P+S+ VSNP S K KK L K PV S A + +P+P V
Sbjct: 81 PLSN-NVSNPDSSPSQKRLKKDNTLPKKNPVNKSSNVAAKKSAATSKSAKLPIPKV---- 135
Query: 582 DHHSLQNLSTRDLILTLMNFLLQSSQVISEHSLPSNTATL 701
HS+ L+ + + N ++S + +H + N +++
Sbjct: 136 --HSINELAPKKTKVKTPNKTKEAS-LSKKHKVNGNKSSM 172
>BT030441-1|ABO52861.1| 759|Drosophila melanogaster RE42355p
protein.
Length = 759
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
PI+ + + K NVN + +KT TP+Q ++ ++ + N+ +P +
Sbjct: 555 PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNNKPIVPPRPRNLAF 614
Query: 582 DHHS 593
DH S
Sbjct: 615 DHKS 618
>AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p protein.
Length = 1508
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
PI+ + + K NVN + +KT TP+Q ++ ++ + N+ +P +
Sbjct: 1304 PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNNKPIVPPRPRNLAF 1363
Query: 582 DHHS 593
DH S
Sbjct: 1364 DHKS 1367
>AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p
protein.
Length = 186
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 91 PTIQCFQCCRYGHIKSQCRSS 153
P +CF+C GHI + CRS+
Sbjct: 96 PRQRCFRCLEEGHIAAHCRST 116
>AY052025-1|AAK93449.1| 1183|Drosophila melanogaster LD47622p protein.
Length = 1183
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
PI+ + + K NVN + +KT TP+Q ++ ++ + N+ +P +
Sbjct: 979 PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNNKPIVPPRPRNLAF 1038
Query: 582 DHHS 593
DH S
Sbjct: 1039 DHKS 1042
>AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,
isoform B protein.
Length = 1504
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
PI+ + + K NVN + +KT TP+Q ++ ++ + N+ +P +
Sbjct: 1300 PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNNKPIVPPRPRNLAF 1359
Query: 582 DHHS 593
DH S
Sbjct: 1360 DHKS 1363
>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
isoform C protein.
Length = 2347
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
PI+ + + K NVN + +KT TP+Q ++ ++ + N+ +P +
Sbjct: 2143 PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNNKPIVPPRPRNLAF 2202
Query: 582 DHHS 593
DH S
Sbjct: 2203 DHKS 2206
>AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,
isoform A protein.
Length = 1508
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 402 PISHIKVSNPKSENVNKSYKKTVFLKPKTPVQLSKGFDKIAHAKLTNEYDIPLPTVGTGY 581
PI+ + + K NVN + +KT TP+Q ++ ++ + N+ +P +
Sbjct: 1304 PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNNKPIVPPRPRNLAF 1363
Query: 582 DHHS 593
DH S
Sbjct: 1364 DHKS 1367
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 745 QIIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLRPGFNFXIPKY 885
+I WN +S +K ++ ++ ++ L ET L +NF I Y
Sbjct: 5 RIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLTSKYNFQIRDY 51
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 748 IIQWNCRSISSKKCDIIYLANKYQPFLISLQETWLR-PGFNFXIPK 882
I+QWN I + ++ L + P ++ LQET L NF PK
Sbjct: 5 ILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPK 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,809,696
Number of Sequences: 53049
Number of extensions: 758157
Number of successful extensions: 1751
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1751
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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