Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_P04
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    25   1.2  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   4.9  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    23   4.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.5  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +3

Query: 219 VICCLCSGSHFATSRKCPEF-FRQKSIKESMAKSCLSYAEALKLHPPVGRSYSDVLSTPI 395
           VI C+        + K  E  FRQ    +++A    S+   +  + PV    +   +TP 
Sbjct: 122 VIACIGEKLEEREAGKTDEVVFRQT---KAIANKINSWDNVVVAYEPVWAIGTGKTATPQ 178

Query: 396 SPPISHIKVSNPKSENVNKSYKKTV 470
                H K+ N  S+NVN++  +TV
Sbjct: 179 QAQEVHEKLRNWFSKNVNQTVAETV 203


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 180 PLPHLKQXGRRP 145
           PLP++ Q GRRP
Sbjct: 22  PLPNVPQPGRRP 33


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 180 PLPHLKQXGRRP 145
           PLP++ Q GRRP
Sbjct: 8   PLPNVPQPGRRP 19


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 781 KKCDIIYLANKYQPFLISLQETWLRPGFNFXIPKY 885
           K CDI++L +          + WLRP + F + KY
Sbjct: 215 KMCDILHLRHT---------KIWLRPDWLFNLTKY 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,227
Number of Sequences: 438
Number of extensions: 4780
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)