Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_O22
(820 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S67859-1|AAB20413.1| 439|Homo sapiens general transcription fac... 118 3e-26
X63468-1|CAA45068.1| 439|Homo sapiens transcription factor TFII... 118 3e-26
AK223401-1|BAD97121.1| 357|Homo sapiens general transcription f... 101 2e-21
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 2.9
AF460285-1|AAM83300.1| 62|Homo sapiens immunoglobulin heavy ch... 32 2.9
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 2.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 2.9
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 32 2.9
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 2.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 2.9
BC150291-1|AAI50292.1| 1731|Homo sapiens Unknown (protein for IM... 31 6.6
BC037208-1|AAH37208.1| 985|Homo sapiens EP400 protein protein. 31 6.6
AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related ... 31 6.6
AB040931-1|BAA96022.1| 1731|Homo sapiens KIAA1498 protein protein. 31 6.6
DQ523960-1|ABI35472.1| 119|Homo sapiens immunoglobulin heavy ch... 30 8.8
>S67859-1|AAB20413.1| 439|Homo sapiens general transcription factor
IIE 56 kda subunit protein.
Length = 439
Score = 118 bits (284), Expect = 3e-26
Identities = 88/285 (30%), Positives = 130/285 (45%), Gaps = 20/285 (7%)
Frame = -1
Query: 820 CSAVVDEDMSAXPKKDSRLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIR- 644
C V+ED SA PKKD+R LLA+FNEQ+E +Y LLRE E + LA EILEPEP +I ++
Sbjct: 157 CHTEVEEDESAMPKKDARTLLARFNEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQ 216
Query: 643 ----GLTSKQSALRPGG---EQWSGEATRNQGMLVEETRVDVTIGDD-KPARDAGALRKE 488
T+ +A GG E W+ + + + + +++ +D A G KE
Sbjct: 217 SKDHAATTAGAASLAGGHHREAWATKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKE 276
Query: 487 RPVWMVESTIASNEQSDSAHSTDXXXXXXXXXXXXXXXAGKEKNDDIMSVLLAHEKQPSA 308
RP+W+ EST+ S+ + AG + N+++M LL HEK+ S+
Sbjct: 277 RPIWLRESTVQGAYGSEDMK--EGGIDMDAFQEREEGHAGPDDNEEVMRALLIHEKKTSS 334
Query: 307 G--NPVSNAVKGLXXXXXXXXXXXXXDPYKLKDELAAVA-------EMEXXXXXXXDNAP 155
V A AAVA E E + P
Sbjct: 335 AMAGSVGAAAPVTAANGSDSESETSESDDDSPPRPAAVAVHKREEDEEEDDEFEEVADDP 394
Query: 154 SVMVNGKTVPLTSVDD--DVIAQMTPTEKETYIQIYQEYYSHMYD 26
VMV G+ + V +++AQMTP EKE YI + Q + +++
Sbjct: 395 IVMVAGRPFSYSEVSQRPELVAQMTPEEKEAYIAMGQRMFEDLFE 439
>X63468-1|CAA45068.1| 439|Homo sapiens transcription factor TFIIE
alpha protein.
Length = 439
Score = 118 bits (283), Expect = 3e-26
Identities = 88/285 (30%), Positives = 130/285 (45%), Gaps = 20/285 (7%)
Frame = -1
Query: 820 CSAVVDEDMSAXPKKDSRLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIR- 644
C V+ED SA PKKD+R LLA+FNEQ+E +Y LLRE E + LA EILEPEP +I ++
Sbjct: 157 CHTEVEEDESAMPKKDARTLLARFNEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQ 216
Query: 643 ----GLTSKQSALRPGG---EQWSGEATRNQGMLVEETRVDVTIGDD-KPARDAGALRKE 488
T+ +A GG E W+ + + + + +++ +D A G KE
Sbjct: 217 SKDHAATTAGAASLAGGHHREAWATKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKE 276
Query: 487 RPVWMVESTIASNEQSDSAHSTDXXXXXXXXXXXXXXXAGKEKNDDIMSVLLAHEKQPSA 308
RP+W+ EST+ S+ + AG + N+++M LL HEK+ S+
Sbjct: 277 RPIWLRESTVQGAYGSEDMK--EGGIDMDAFQEREEGHAGPDDNEEVMRALLIHEKKTSS 334
Query: 307 G--NPVSNAVKGLXXXXXXXXXXXXXDPYKLKDELAAVA-------EMEXXXXXXXDNAP 155
V A AAVA E E + P
Sbjct: 335 AMAGSVGAAAPVTAANGDDSESETSESDDDSPPRPAAVAVHKREEDEEEDDEFEEVADDP 394
Query: 154 SVMVNGKTVPLTSVDD--DVIAQMTPTEKETYIQIYQEYYSHMYD 26
VMV G+ + V +++AQMTP EKE YI + Q + +++
Sbjct: 395 IVMVAGRPFSYSEVSQRPELVAQMTPEEKEAYIAMGQRMFEDLFE 439
>AK223401-1|BAD97121.1| 357|Homo sapiens general transcription
factor IIE, polypeptide 1 (alpha subunit, 56kD) variant
protein.
Length = 357
Score = 101 bits (243), Expect = 2e-21
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Frame = -1
Query: 820 CSAVVDEDMSAXPKKDSRLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIR- 644
C V+ED SA PKKD+R LLA+FNEQ+E +Y LLRE E + LA EILEPEP +I ++
Sbjct: 157 CHTEVEEDESAMPKKDARTLLARFNEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQ 216
Query: 643 ----GLTSKQSALRPGG---EQWSGEATRNQGMLVEETRVDVTIGDD-KPARDAGALRKE 488
T+ +A GG E W+ + + + + +++ +D A G KE
Sbjct: 217 SKDHAATTAGAASLAGGHHREAWATKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKE 276
Query: 487 RPVWMVESTIASNEQSDSAHSTDXXXXXXXXXXXXXXXAGKEKNDDIMSVLLAHEKQPSA 308
RP+W+ EST+ S+ + AG + N+++M LL HEK+ S+
Sbjct: 277 RPIWLRESTVQGAYGSED--MKEGGIDMDAFQEREEGHAGPDDNEEVMRALLIHEKKTSS 334
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 372 QGRRRTTTSCPSCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNRKIRTNS 220
+GR R+ T S +R + + S+TP R + R++TPA R+ RT S
Sbjct: 581 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRS 629
Score = 31.5 bits (68), Expect = 3.8
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = -2
Query: 711 RSKASNWLQ----RYWNQNRSILTQYED*RQSSPHCVRAASNGRVRRRATKACWSRRHEL 544
RS++ W + + W ++RS + P R+ + R R R+ A R H
Sbjct: 507 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSR 565
Query: 543 TSPSETTSPRGTPARYARSGPSGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPQGR 364
+ + S TPAR RS S+ R
Sbjct: 566 SPATRGRSRSRTPARRGRSRSR---TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 622
Query: 363 RRTTTSCP----SCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNR 238
RR+ T P S S + R+ + S+TP R + R++TPA R
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 668
>AF460285-1|AAM83300.1| 62|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 62
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 798 TCRRYQKKIPDYYWPSSMSSWKRFTYYCERSKASNWLQRYWNQ 670
T R K Y +S+ + YYC R K+S+W YW Q
Sbjct: 20 TISRDNAKNSLYLQMNSLRAEDTAVYYCARDKSSSWYFDYWGQ 62
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 372 QGRRRTTTSCPSCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNRKIRTNS 220
+GR R+ T S +R + + S+TP R + R++TPA R+ RT S
Sbjct: 581 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRS 629
Score = 31.5 bits (68), Expect = 3.8
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = -2
Query: 711 RSKASNWLQ----RYWNQNRSILTQYED*RQSSPHCVRAASNGRVRRRATKACWSRRHEL 544
RS++ W + + W ++RS + P R+ + R R R+ A R H
Sbjct: 507 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSR 565
Query: 543 TSPSETTSPRGTPARYARSGPSGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPQGR 364
+ + S TPAR RS S+ R
Sbjct: 566 SPATRGRSRSRTPARRGRSRSR---TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 622
Query: 363 RRTTTSCP----SCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNR 238
RR+ T P S S + R+ + S+TP R + R++TPA R
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 668
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 372 QGRRRTTTSCPSCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNRKIRTNS 220
+GR R+ T S +R + + S+TP R + R++TPA R+ RT S
Sbjct: 581 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRS 629
Score = 31.5 bits (68), Expect = 3.8
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = -2
Query: 711 RSKASNWLQ----RYWNQNRSILTQYED*RQSSPHCVRAASNGRVRRRATKACWSRRHEL 544
RS++ W + + W ++RS + P R+ + R R R+ A R H
Sbjct: 507 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSR 565
Query: 543 TSPSETTSPRGTPARYARSGPSGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPQGR 364
+ + S TPAR RS S+ R
Sbjct: 566 SPATRGRSRSRTPARRGRSRSR---TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 622
Query: 363 RRTTTSCP----SCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNR 238
RR+ T P S S + R+ + S+TP R + R++TPA R
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 668
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 372 QGRRRTTTSCPSCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNRKIRTNS 220
+GR R+ T S +R + + S+TP R + R++TPA R+ RT S
Sbjct: 546 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRS 594
Score = 31.5 bits (68), Expect = 3.8
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = -2
Query: 711 RSKASNWLQ----RYWNQNRSILTQYED*RQSSPHCVRAASNGRVRRRATKACWSRRHEL 544
RS++ W + + W ++RS + P R+ + R R R+ A R H
Sbjct: 472 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSR 530
Query: 543 TSPSETTSPRGTPARYARSGPSGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPQGR 364
+ + S TPAR RS S+ R
Sbjct: 531 SPATRGRSRSRTPARRGRSRSR---TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 587
Query: 363 RRTTTSCP----SCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNR 238
RR+ T P S S + R+ + S+TP R + R++TPA R
Sbjct: 588 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 633
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 372 QGRRRTTTSCPSCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNRKIRTNS 220
+GR R+ T S +R + + S+TP R + R++TPA R+ RT S
Sbjct: 371 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRS 419
Score = 31.5 bits (68), Expect = 3.8
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = -2
Query: 711 RSKASNWLQ----RYWNQNRSILTQYED*RQSSPHCVRAASNGRVRRRATKACWSRRHEL 544
RS++ W + + W ++RS + P R+ + R R R+ A R H
Sbjct: 297 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSR 355
Query: 543 TSPSETTSPRGTPARYARSGPSGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPQGR 364
+ + S TPAR RS S+ R
Sbjct: 356 SPATRGRSRSRTPARRGRSRSR---TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 412
Query: 363 RRTTTSCP----SCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNR 238
RR+ T P S S + R+ + S+TP R + R++TPA R
Sbjct: 413 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 458
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 372 QGRRRTTTSCPSCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNRKIRTNS 220
+GR R+ T S +R + + S+TP R + R++TPA R+ RT S
Sbjct: 629 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRS 677
Score = 31.5 bits (68), Expect = 3.8
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = -2
Query: 711 RSKASNWLQ----RYWNQNRSILTQYED*RQSSPHCVRAASNGRVRRRATKACWSRRHEL 544
RS++ W + + W ++RS + P R+ + R R R+ A R H
Sbjct: 555 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSR 613
Query: 543 TSPSETTSPRGTPARYARSGPSGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPQGR 364
+ + S TPAR RS S+ R
Sbjct: 614 SPATRGRSRSRTPARRGRSRSR---TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 670
Query: 363 RRTTTSCP----SCSHTRNNRAQETLSQTPLRVSKQRAQTPATTNR 238
RR+ T P S S + R+ + S+TP R + R++TPA R
Sbjct: 671 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 716
>BC150291-1|AAI50292.1| 1731|Homo sapiens Unknown (protein for
IMAGE:8860133) protein.
Length = 1731
Score = 30.7 bits (66), Expect = 6.6
Identities = 20/94 (21%), Positives = 45/94 (47%)
Frame = -1
Query: 769 RLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIRGLTSKQSALRPGGEQWSG 590
R + A ++E + + +V IKL E+ E +N ++ ++ + LRP G
Sbjct: 831 RRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALN-LQKVSRRGKELRPKGFDALQ 889
Query: 589 EATRNQGMLVEETRVDVTIGDDKPARDAGALRKE 488
E++ + GM + + +++ DD+ + + +E
Sbjct: 890 ESSLDSGMSGRKRKASISLTDDEVDDEEETIEEE 923
>BC037208-1|AAH37208.1| 985|Homo sapiens EP400 protein protein.
Length = 985
Score = 30.7 bits (66), Expect = 6.6
Identities = 20/94 (21%), Positives = 45/94 (47%)
Frame = -1
Query: 769 RLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIRGLTSKQSALRPGGEQWSG 590
R + A ++E + + +V IKL E+ E +N ++ ++ + LRP G
Sbjct: 867 RRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALN-LQKVSRRGKELRPKGFDALQ 925
Query: 589 EATRNQGMLVEETRVDVTIGDDKPARDAGALRKE 488
E++ + GM + + +++ DD+ + + +E
Sbjct: 926 ESSLDSGMSGRKRKASISLTDDEVDDEEETIEEE 959
>AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related
protein protein.
Length = 3124
Score = 30.7 bits (66), Expect = 6.6
Identities = 20/94 (21%), Positives = 45/94 (47%)
Frame = -1
Query: 769 RLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIRGLTSKQSALRPGGEQWSG 590
R + A ++E + + +V IKL E+ E +N ++ ++ + LRP G
Sbjct: 831 RRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALN-LQKVSRRGKELRPKGFDALQ 889
Query: 589 EATRNQGMLVEETRVDVTIGDDKPARDAGALRKE 488
E++ + GM + + +++ DD+ + + +E
Sbjct: 890 ESSLDSGMSGRKRKASISLTDDEVDDEEETIEEE 923
>AB040931-1|BAA96022.1| 1731|Homo sapiens KIAA1498 protein protein.
Length = 1731
Score = 30.7 bits (66), Expect = 6.6
Identities = 20/94 (21%), Positives = 45/94 (47%)
Frame = -1
Query: 769 RLLLAKFNEQLETLYILLREVEGIKLAPEILEPEPVDINTIRGLTSKQSALRPGGEQWSG 590
R + A ++E + + +V IKL E+ E +N ++ ++ + LRP G
Sbjct: 832 RRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALN-LQKVSRRGKELRPKGFDALQ 890
Query: 589 EATRNQGMLVEETRVDVTIGDDKPARDAGALRKE 488
E++ + GM + + +++ DD+ + + +E
Sbjct: 891 ESSLDSGMSGRKRKASISLTDDEVDDEEETIEEE 924
>DQ523960-1|ABI35472.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 753 SSMSSWKRFTYYCERSKASNWLQRYWNQ 670
SS+++ YYC R S WL YW Q
Sbjct: 84 SSVTAADAAVYYCARWVPSQWLSDYWGQ 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,344,465
Number of Sequences: 237096
Number of extensions: 1774369
Number of successful extensions: 10593
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10584
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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