Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_O11
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   2.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 344  PSVGSTTDEHGHSRPVAFMPNRVNGQY 264
            P VG  T+   HSR  +    R NG+Y
Sbjct: 1761 PPVGHPTNASAHSRSGSQSMPRQNGRY 1787


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 485 TVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVT-GGIIYDVIVEPPSVG 333
           T+L     K+     +Q P     +  + +SY   T  G+IY  ++  PS G
Sbjct: 805 TILSPVREKLSSSQPMQPPQ-QNPYMFLPVSYMSTTMAGVIYPPVIGTPSTG 855


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 231 EEKARRKTFHDVLTINTIRHEGYRS 305
           E+K R+K+  DV  +   R + Y+S
Sbjct: 122 EQKRRKKSLDDVKILRNDRIDSYKS 146


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 301 GLLCPCSSVVEPTLGGSTI 357
           GLL P  +++EPT G + I
Sbjct: 93  GLLKPGCTIIEPTSGNTGI 111


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 716 RPVRKCYFC 690
           +P+ KCYFC
Sbjct: 422 KPLDKCYFC 430


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 497 AIPFTVLEIPNIKIKKPTWL 438
           A PF  +E P+I +   TWL
Sbjct: 328 ATPFVPVEPPDILMPALTWL 347


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 69  RMNLEANFGLFDFWAGI 19
           +M+   NFG  DFW  I
Sbjct: 534 QMDSSTNFGREDFWNSI 550


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 69  RMNLEANFGLFDFWAGI 19
           +M+   NFG  DFW  I
Sbjct: 534 QMDSSTNFGREDFWNSI 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,547
Number of Sequences: 438
Number of extensions: 4117
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)