Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_O09
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69292-1|CAA49154.1| 881|Homo sapiens smooth muscle mysosin he... 32 1.8
D10667-1|BAA36971.1| 1052|Homo sapiens smooth muscle myosin heav... 32 1.8
BC104906-1|AAI04907.1| 1938|Homo sapiens myosin, heavy chain 11,... 32 1.8
BC101677-1|AAI01678.1| 1938|Homo sapiens myosin, heavy chain 11,... 32 1.8
BC080545-1|AAH80545.1| 498|Homo sapiens MYH11 protein protein. 32 1.8
AY520817-1|AAS98911.1| 1945|Homo sapiens smooth muscle myosin he... 32 1.8
AY520816-1|AAS98910.1| 1979|Homo sapiens smooth muscle myosin he... 32 1.8
AF020091-1|AAB69327.1| 622|Homo sapiens smooth muscle myosin he... 32 1.8
AF013570-1|AAB69326.1| 588|Homo sapiens smooth muscle myosin he... 32 1.8
AF001548-1|AAC31665.1| 1857|Homo sapiens Myosin heavy chain (MHY... 32 1.8
AB020673-1|BAA74889.2| 1984|Homo sapiens KIAA0866 protein protein. 32 1.8
X13939-1|CAA32122.1| 328|Homo sapiens laminin B2 protein. 31 4.1
S67240-1|AAB28951.1| 330|Homo sapiens smooth muscle myosin heav... 31 4.1
S67238-1|AAB28950.1| 296|Homo sapiens smooth muscle myosin heav... 31 4.1
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 4.1
M27654-1|AAA59489.1| 217|Homo sapiens laminin B2 protein. 31 4.1
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 31 4.1
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 4.1
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 4.1
BC070094-1|AAH70094.1| 279|Homo sapiens pleckstrin homology-lik... 30 7.2
CR536513-1|CAG38751.1| 545|Homo sapiens TRIP10 protein. 29 9.5
BT020171-1|AAV43773.1| 545|Homo sapiens thyroid hormone recepto... 29 9.5
BT020167-1|AAV38969.1| 545|Homo sapiens thyroid hormone recepto... 29 9.5
BT006698-1|AAP35344.1| 545|Homo sapiens thyroid hormone recepto... 29 9.5
BC013002-1|AAH13002.1| 545|Homo sapiens thyroid hormone recepto... 29 9.5
AY081141-1|AAL89588.1| 456|Homo sapiens truncated Cdc42 interac... 29 9.5
AJ000414-1|CAA04062.1| 545|Homo sapiens Cdc42-interacting prote... 29 9.5
AF380114-1|AAK77492.1| 593|Homo sapiens FELIC protein. 29 9.5
>X69292-1|CAA49154.1| 881|Homo sapiens smooth muscle mysosin heavy
chain protein.
Length = 881
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 649 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESSRQQLERQNKELRS 708
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 709 KLHEMEGAVK 718
>D10667-1|BAA36971.1| 1052|Homo sapiens smooth muscle myosin heavy
chain protein.
Length = 1052
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 854 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 913
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 914 KLHEMEGAVK 923
>BC104906-1|AAI04907.1| 1938|Homo sapiens myosin, heavy chain 11,
smooth muscle protein.
Length = 1938
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 1740 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 1799
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 1800 KLHEMEGAVK 1809
>BC101677-1|AAI01678.1| 1938|Homo sapiens myosin, heavy chain 11,
smooth muscle protein.
Length = 1938
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 1740 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 1799
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 1800 KLHEMEGAVK 1809
>BC080545-1|AAH80545.1| 498|Homo sapiens MYH11 protein protein.
Length = 498
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 266 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 325
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 326 KLHEMEGAVK 335
>AY520817-1|AAS98911.1| 1945|Homo sapiens smooth muscle myosin heavy
chain isoform SM2 protein.
Length = 1945
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 1747 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 1806
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 1807 KLHEMEGAVK 1816
>AY520816-1|AAS98910.1| 1979|Homo sapiens smooth muscle myosin heavy
chain isoform SM1 protein.
Length = 1979
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 1747 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 1806
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 1807 KLHEMEGAVK 1816
>AF020091-1|AAB69327.1| 622|Homo sapiens smooth muscle myosin heavy
chain SM1 protein.
Length = 622
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 390 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 449
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 450 KLHEMEGAVK 459
>AF013570-1|AAB69326.1| 588|Homo sapiens smooth muscle myosin heavy
chain SM2 protein.
Length = 588
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 390 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 449
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 450 KLHEMEGAVK 459
>AF001548-1|AAC31665.1| 1857|Homo sapiens Myosin heavy chain (MHY11)
(5'partial) protein.
Length = 1857
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 1625 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 1684
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 1685 KLHEMEGAVK 1694
>AB020673-1|BAA74889.2| 1984|Homo sapiens KIAA0866 protein protein.
Length = 1984
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + S Q E + + +KEL+
Sbjct: 1752 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRS 1811
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 1812 KLHEMEGAVK 1821
>X13939-1|CAA32122.1| 328|Homo sapiens laminin B2 protein.
Length = 328
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 277 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 98
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 240 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 299
>S67240-1|AAB28951.1| 330|Homo sapiens smooth muscle myosin heavy
chain isoform SM1 protein.
Length = 330
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + + Q E + + +KEL+
Sbjct: 98 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERTTAQKNESARQQLERQNKELRS 157
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 158 KLHEMEGAVK 167
>S67238-1|AAB28950.1| 296|Homo sapiens smooth muscle myosin heavy
chain isoform SM2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 370 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL--EHVRSLSKELQD 197
+LEE L + G + ++ +A ++ +++ ++ + + Q E + + +KEL+
Sbjct: 98 QLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERTTAQKNESARQQLERQNKELRS 157
Query: 196 NLHELETAVR 167
LHE+E AV+
Sbjct: 158 KLHEMEGAVK 167
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 277 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 98
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>M27654-1|AAA59489.1| 217|Homo sapiens laminin B2 protein.
Length = 217
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 277 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 98
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 129 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 188
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 277 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 98
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 277 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 98
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 277 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 98
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>BC070094-1|AAH70094.1| 279|Homo sapiens pleckstrin homology-like
domain, family B, member 3 protein.
Length = 279
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 452 RITQLKLIK*ELYICSSANTRGFRDELRARRIAAHPERTRLREDGEMDGSPEERSENRHR 273
R+ +L+ + EL I R EL R+AA E +LRE E + E+R +
Sbjct: 118 RVKELQRQRKELRIEMEVEVALLRGELAGERVAARREEEQLRELLEQQAASEQRGRQQRE 177
Query: 272 R 270
+
Sbjct: 178 Q 178
>CR536513-1|CAG38751.1| 545|Homo sapiens TRIP10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>BT020171-1|AAV43773.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>BT020167-1|AAV38969.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>BT006698-1|AAP35344.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>BC013002-1|AAH13002.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>AY081141-1|AAL89588.1| 456|Homo sapiens truncated Cdc42
interaction protein 4 protein.
Length = 456
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>AJ000414-1|CAA04062.1| 545|Homo sapiens Cdc42-interacting protein
4 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
>AF380114-1|AAK77492.1| 593|Homo sapiens FELIC protein.
Length = 593
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 340 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 164
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 163 ADV 155
DV
Sbjct: 372 KDV 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,567,307
Number of Sequences: 237096
Number of extensions: 1383453
Number of successful extensions: 4079
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4075
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -