Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_O05
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF012903-1|AAB66834.1| 254|Homo sapiens P2X4 ATP-gated cation c... 31 5.3
Y07684-1|CAA68948.1| 388|Homo sapiens P2X4 purinoceptor protein. 31 7.1
U87270-1|AAD00556.1| 388|Homo sapiens P2X4 purinoreceptor protein. 31 7.1
U83993-1|AAD00553.1| 388|Homo sapiens P2X4 purinoreceptor protein. 31 7.1
BT019738-1|AAV38543.1| 388|Homo sapiens purinergic receptor P2X... 31 7.1
BC033826-1|AAH33826.1| 388|Homo sapiens purinergic receptor P2X... 31 7.1
AF191093-1|AAF06661.1| 388|Homo sapiens P2X4 purinoceptor protein. 31 7.1
AF000234-1|AAB58405.1| 354|Homo sapiens P2x purinoceptor protein. 31 7.1
>AF012903-1|AAB66834.1| 254|Homo sapiens P2X4 ATP-gated cation
channel protein protein.
Length = 254
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 89 VAAWCPVEDDTHVPQPAFFKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 148
Query: 733 KKTDEF 750
KTD F
Sbjct: 149 AKTDPF 154
>Y07684-1|CAA68948.1| 388|Homo sapiens P2X4 purinoceptor protein.
Length = 388
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 161 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 220
Query: 733 KKTDEF 750
KTD F
Sbjct: 221 AKTDPF 226
>U87270-1|AAD00556.1| 388|Homo sapiens P2X4 purinoreceptor protein.
Length = 388
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 161 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 220
Query: 733 KKTDEF 750
KTD F
Sbjct: 221 AKTDPF 226
>U83993-1|AAD00553.1| 388|Homo sapiens P2X4 purinoreceptor protein.
Length = 388
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 161 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 220
Query: 733 KKTDEF 750
KTD F
Sbjct: 221 AKTDPF 226
>BT019738-1|AAV38543.1| 388|Homo sapiens purinergic receptor P2X,
ligand-gated ion channel, 4 protein.
Length = 388
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 161 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 220
Query: 733 KKTDEF 750
KTD F
Sbjct: 221 AKTDPF 226
>BC033826-1|AAH33826.1| 388|Homo sapiens purinergic receptor P2X,
ligand-gated ion channel, 4 protein.
Length = 388
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 161 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 220
Query: 733 KKTDEF 750
KTD F
Sbjct: 221 AKTDPF 226
>AF191093-1|AAF06661.1| 388|Homo sapiens P2X4 purinoceptor protein.
Length = 388
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 161 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 220
Query: 733 KKTDEF 750
KTD F
Sbjct: 221 AKTDPF 226
>AF000234-1|AAB58405.1| 354|Homo sapiens P2x purinoceptor protein.
Length = 354
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +1
Query: 553 IMVWYRYHNTTKYYQAGLGRLIVPVPLICNSTMVFFEINFVNYSKFKNIMNLYDKKCIYK 732
+ W + T Q + L+ + + + + NF + NI Y K CIY
Sbjct: 127 VAAWCPVEDDTHVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYD 186
Query: 733 KKTDEF 750
KTD F
Sbjct: 187 AKTDPF 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,698,810
Number of Sequences: 237096
Number of extensions: 1964804
Number of successful extensions: 2518
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2518
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -