Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_O02
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1953|AAF53010.1|   98|Drosophila melanogaster CG17127-P...   132   7e-31
AE014134-2264|AAF53229.2| 1117|Drosophila melanogaster CG17178-P...    29   5.8  
AF247768-1|AAF86228.1|  809|Drosophila melanogaster Toll-4 protein.    29   7.7  
AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-P...    29   7.7  

>AE014134-1953|AAF53010.1|   98|Drosophila melanogaster CG17127-PA
           protein.
          Length = 98

 Score =  132 bits (318), Expect = 7e-31
 Identities = 63/78 (80%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
 Frame = -1

Query: 771 PQ-REGAVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQV 595
           PQ REGA ++NEAI+QAQ T LIPKDA IQ VQEGIEL AY+ IPGNQRINL+EILGDQV
Sbjct: 21  PQNREGAAYTNEAIRQAQQTLLIPKDAQIQNVQEGIELGAYEQIPGNQRINLFEILGDQV 80

Query: 594 PSEVINNLQSQIDQVGRN 541
           PSEVINNLQSQ+DQ+GRN
Sbjct: 81  PSEVINNLQSQVDQIGRN 98


>AE014134-2264|AAF53229.2| 1117|Drosophila melanogaster CG17178-PA
           protein.
          Length = 1117

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +2

Query: 359 LSLNFC*EITVAHTNYVYDVSLRLELEALSKIFSSIKFLSRVSCHHNSLLKT---CFFLY 529
           LS+NFC E    HT Y+Y  S+     +L+ +F+ +      +  H+ +L T    + +Y
Sbjct: 94  LSVNFCDEFIAKHTWYMYASSI---FASLTLVFADLTESIYHTYAHSWILGTFYDTYIIY 150

Query: 530 *LAQFLP 550
            +  FLP
Sbjct: 151 MIYMFLP 157


>AF247768-1|AAF86228.1|  809|Drosophila melanogaster Toll-4 protein.
          Length = 809

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = -2

Query: 359 VYHFHLIQQLTISTSRRYYKNHKFIKIILPKHLVDSGY*KNPTSTHYL---HSIIYSILL 189
           V+  +L+ +L    S   Y N K + +     L      + P S HYL   H+ I ++  
Sbjct: 97  VFQSNLLAELP-DNSLEGYHNLKSLDVSY-NQLTSLSVSQLPESLHYLDIRHNKITTLSP 154

Query: 188 HVYKY---VNKNWKYENKFDTFCNEHH 117
            V +Y   VN   +Y NK+  +C+E+H
Sbjct: 155 QVVEYLYSVNVFNQYGNKWSIYCDEYH 181


>AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-PA
           protein.
          Length = 1125

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = -2

Query: 359 VYHFHLIQQLTISTSRRYYKNHKFIKIILPKHLVDSGY*KNPTSTHYL---HSIIYSILL 189
           V+  +L+ +L    S   Y N K + +     L      + P S HYL   H+ I ++  
Sbjct: 413 VFQSNLLAELP-DNSLEGYHNLKSLDVSY-NQLTSLSVSQLPESLHYLDIRHNKITTLSP 470

Query: 188 HVYKY---VNKNWKYENKFDTFCNEHH 117
            V +Y   VN   +Y NK+  +C+E+H
Sbjct: 471 QVVEYLYSVNVFNQYGNKWSIYCDEYH 497


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,184,812
Number of Sequences: 53049
Number of extensions: 712241
Number of successful extensions: 1650
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)